| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_2411 |
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| Symbol | |
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| ID | 8358566 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 2966542 |
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| End bp | 2968449 |
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| Gene Length | 1908 bp |
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| Protein Length | 635 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 644964597 |
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| Product | AAA ATPase |
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| Protein accession | YP_003122103 |
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| Protein GI | 256421450 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1112] Superfamily I DNA and RNA helicases and helicase subunits |
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| TIGRFAM ID | [TIGR00376] DNA helicase, putative |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.000174617 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.335241 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATTATT TCAAAAAGCT GCTTGAATTA CTGAAGACAG AGCGGGAAGA AGACAGAAAA
GCATACCTGG AAATGACAGC ATCTACGTCT GTAGCCGAGC GCAGGGCGAA TGGACTCAGC
TGGTACCCTA TTGCCATCAG AGGTTCAGAA ATGAGCCGGG GCGATTATCT CACGGTAGAA
GTAGAGCGCA CCACGCACCA GGATATCAAT CACCAGCTCC GTTTTGGCGT ATCAGCAGTA
CTTTTTTCGA ATCATGATCC AAAAACCGAC CGGGTAGAAG GTACGATTTC CTACCAGGGA
GGTAATAAGC TGAAGATCAC CCTGCGTACC GATGAACTGC CCGAATGGGC TAACAACGGC
AAACTGGGTA TCGACCTCCT CTTTGACGAC AACAGCTATG ACGAGATGCA GAATGCACTC
AAACAGGCTG ATACCCTTGC CGAAAAAGGA GAAAACGACC ATCTTATCAG GGTGCTGACG
GGTGAAAAGT CACCCGGTTT TCACGACAAT CTCCCTCCTG TTATTATTCC CAGACTCAAT
GCCTCTCAGC AACATGCGGT GAATCGTATA CTTGCTGCGA ATGATCTCGC GATTGTACAT
GGCCCTCCGG GTACCGGAAA GACCACCACA CTGGTGCAGG CTATCAAAGC ACTGATCAAA
CAGGATAATA AACAGATACT TGTCGTAGCG CCCAGTAACA CCGCTGTGGA CCTGCTGAGT
GAAAAACTAT CTGAAGAAGG ACTTAATGTA CTCAGGGTAG GTAACCCTGC CCGTGTTTCT
GAACGTTTAT CTTCCCTGAC ACTGGATAGC CGCATGACGG AACATGCCAG TATGAAGGAG
ATCAAACGTC TGAAAAAACA GGCCAATGAG TTCAGGGACA TGGCCCACAA GTACAAACGC
AACTTCGGTA AAGCAGAACG TGAACAGCGC AAAGCCCTGT TTGACGAAGC CCGTAATATC
ATGAAATCGG TAGAGAACAC CGAACAGTAT ATCATGGACG ATCTGATGGC AAAAGCACAG
ATCATTACGG CTACGCTGGT CGGCGCCAAT CACTATACCG TACGTAAACT GAAATACCAT
ACCATCGTTA TCGATGAAGC AGGACAGGCA CTGGAACCGG CCTGCTGGAT ACCGATATTG
AAAGCGCAGA AGGTGATACT GGCCGGCGAC CATTGTCAGC TGTCACCTAC TGTCAAGTCG
GACGAAGCAG CCAGGAAAGG TTTAAGTACG ACCCTGCTGG AAAAATGTAT TGCCCTGCAT
CCTGAGTCAG TGGTATTGCT GGAAGAACAA TACCGTATGC ATGAGATGAT CATGGGATAT
TCGTCTGCTG TTTTCTATGC CGATAAACTG AAAGCACATG CTTCTGTGGC AGCGCATACA
TTGTTCCCCG ATGATATGCC ATTGTCATTT GTAGATACGG CAGGTTGCGG CTTTGACGAA
AAAACAGAAG GCACCAGTAC GACCAATCCG GAAGAAGCAG CCTTCCTGTT CAAACACCTG
CGGCAATTTG TTACAGGACT ACACACACAT TATCAGCCGC AGCAATTCCC CAGCATTGCT
ATCATATCCC CTTATAAACA ACAGATCCAT ATTCTGAAAG AACAACTGCT GTCTGTACCT
GAATTGCAGG CTTACGGAGA CAGAATATCT GTAAATACGA TCGACAGCTT CCAGGGCCAG
GAAAGAGATA TTGTCTACAT CAGCATGACC AGGAGCAATA ACGACAATAA AATCGGCTTC
CTCTCTGACA TCAGACGTAT GAATGTGGCC ATGACAAGGG CCCGAAAGAA GCTGGTAATC
ATAGGTGACA GCGCTACTTT GTCCCAATTG CCCTTCTATG CGGGGTTTAT CGCCTATGCA
GAGCAGCAGA ACGCCTACCA GAGCGCATGG GAATTTATGG ACAACTAA
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| Protein sequence | MDYFKKLLEL LKTEREEDRK AYLEMTASTS VAERRANGLS WYPIAIRGSE MSRGDYLTVE
VERTTHQDIN HQLRFGVSAV LFSNHDPKTD RVEGTISYQG GNKLKITLRT DELPEWANNG
KLGIDLLFDD NSYDEMQNAL KQADTLAEKG ENDHLIRVLT GEKSPGFHDN LPPVIIPRLN
ASQQHAVNRI LAANDLAIVH GPPGTGKTTT LVQAIKALIK QDNKQILVVA PSNTAVDLLS
EKLSEEGLNV LRVGNPARVS ERLSSLTLDS RMTEHASMKE IKRLKKQANE FRDMAHKYKR
NFGKAEREQR KALFDEARNI MKSVENTEQY IMDDLMAKAQ IITATLVGAN HYTVRKLKYH
TIVIDEAGQA LEPACWIPIL KAQKVILAGD HCQLSPTVKS DEAARKGLST TLLEKCIALH
PESVVLLEEQ YRMHEMIMGY SSAVFYADKL KAHASVAAHT LFPDDMPLSF VDTAGCGFDE
KTEGTSTTNP EEAAFLFKHL RQFVTGLHTH YQPQQFPSIA IISPYKQQIH ILKEQLLSVP
ELQAYGDRIS VNTIDSFQGQ ERDIVYISMT RSNNDNKIGF LSDIRRMNVA MTRARKKLVI
IGDSATLSQL PFYAGFIAYA EQQNAYQSAW EFMDN
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