Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_2380 |
Symbol | |
ID | 8358535 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | - |
Start bp | 2925902 |
End bp | 2929468 |
Gene Length | 3567 bp |
Protein Length | 1188 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 644964566 |
Product | molybdopterin oxidoreductase |
Protein accession | YP_003122072 |
Protein GI | 256421419 |
COG category | [R] General function prediction only |
COG ID | [COG3383] Uncharacterized anaerobic dehydrogenase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.291899 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACAGGCA ATCATCAACA TAATAAACTT CCTGCGGGCA GCTACCGTAG CACCTGCTGT TATTGCGGCG TAGGTTGCGG TATCGTTGTC AACAGGGACA GGCAGGGAAA AATCACAGTA GAAGGAGATA AAGATCATCC GGTTAACAAA GGTATGCTTT GTTCCAAAGG CATGAATCTT CATTACACCG TGATGGACAC ATCAGACAGG CTTTATTACC CGGAAATGCG TTATCACCGG CAAATGCCGA GACAGCGCGT TTCCTGGGAC CAGGCGCTCG AACGCACTGC TGCCGTATTT AAACAGATGA TTGAACAATA TGGTCCTGAT TCAGTTGCTT TCTATGCATC CGGACAATGC CTCACAGAAG AATATTATGT TGTCAATAAA CTGATCAAGG GATTCATTGG CAGTAATAAT ATCGATACAA ACTCCAGGCT CTGTATGAGC AGTGCAGTAG CCGCCTATAA ATTATCGCTC GGCGAAGACA GCGTACCTGG TTGCTATGAT GATATCGAAC AGACGGATTG CATCTTCGTA GCAGGCGCTA ATCCTGCCTG GTGTCATCCG ATCTTATGGC GCAGGATCGA AGCTGCGAAA GAAAAGAATC CGCACATGAA GATCATCGTC AGCGATCCCC GCGTTACACA AAGTTGCGCC ATCGCTGATA TACACCTGCA ACTCATGCCG GGTACCGATA TCGTATTACA TCATGCTATC GGCCGCCTGT TGATAGAAGC AGGTCATATC GATCACGATT TCATTCAACA ACATACAGAA GGTTTCTCTA AATACCGGGA CACCGTCATG GAGCGCAGCA TCAGCAGCGC AGCTGCCATT TGCGGTATTA CAGAAGACCT GATCTATGAA GCCGCAGCGC TGCTGGGCAA TGTACGCAGT TTCATGACCA TGTGGACCAT GGGACTGAAC CAGAGCGCTG TAGGCGTTAA TAAGAACCTG AGCCTGATCA ACCTCAATCT GATCACCGGT AAAATCGGTA AACCCGGCTG TGGCCCCTTC TCTCTTACCG GACAACCCAA TGCCATGGGC GGTAGAGAAG TAGGCGGATT ATCCAACATG CTGCCGGCAC ACCGTGTACT GGATAACCCT GCACACCGCA AGGAAGTAGA AGATTTCTGG GGAGGTACGA AAATCTCCGA CAAACCGGGT CTTACCGCTA CCGAAATGTT TGAGGCACTG AATGACGGAA GACTCAAAGC CATCTGGATC ATGTGTACCA ATCCGCTGGT AAGTCTGCCG GACGCCCGTA TGGCCGAAGC TGCCCTGCAA AAGGCGAAGT TCGTCGTTGT ACAGGAGATC TCGAATAAAC CGGAAACAGT CCGCTATGCA GATGTCGTAT TACCTGCTGC CGCATGGACC GAAAAAGAAG GGACCATGAC TAATGCAGAA AGAAGGGTCA CTTATCTGCA GCGTGTCAAC GAAGCGCCGG GAGAAGCCTT ACCGGATGCT GAGATCATCT GCCGCTTCGC ACAAAAAATG GGCTTTAAAG GTTTTGATTA TACAGGTCCT GCTGACATTT ATGCGGAGCA CAGCCGCCTG ACAGCCGGCA CCAATATCGA TGTCAGCGGA GTAGATTATA AAGTGCTGAA AGATAAACGC TCCCTGCAAT GGCCTTATCC TGCCGGCACG ACCGGTCCGG GTACACCCAG ACTCTTTACG GATCATCATT TCTATACATC ATCCACCAAA GCGATCATAC ATTCTTTCCC GGATGATAAC CGGTCAGCAC CACCACATCC ACAGTTTCCG CTTATCCTTA CTACAGGACG TATAAGGGAT CAATGGCACA CTATGAGCAA AACAGGTAAG GTGAGCAAGC TGAAACAGCA TATTCCTGCT CCCCTGCTGG AAATACATCC GGAAGATGCC AGAGAGCGCC ATATTAAAGA AGCAGATATC GTAGAGATAT TCAGTGAAAA CGGCACAGTA CGTGTGAAAG CACAACTGAG CACTTCCATT AAAAAAGGAG TGGTATTCCT CCCGATGCAC TGGGGCAAGA TACTGGACAA TGACCTTAAC AGGGCAAACA ACCTTACCCA CAGGCTGGTG GATAAGATAT CCAAACAACC GGATCTGAAA TATACGGCGG TACAGGTACA ACTCTACCGC AAACCCCAGC AACGTATTAT CATCATTGGC GCAGGCGCAG GCGCCTGTGG CTTTGTAAAA TCATACAGAG AACTGAATAC GACTGATACC ATTACCGTAT TCAGCAAAGA AGATCAGCCC TTCTATAACA GGGTGATGCT ACCTGACTAT ATCAGCGGCA CCCAGCAATG GCAGCAGCTG GTGAAGATGA CAGACGATGA AGAATCTATG CTGGACATCA TATTACACCG GGGCGTCAGT ATTGAAAAGA TAGACAGGGA ACAAAAAACA GTGACCGACA GTAAAGGCCG CGTACACGAA TATGATGTAC TCATTCTGGG CATGGGTAGC CGTGCGGCCA CACTGAAAGA CACACCCGCG CTGCCAGGCA TTTTCACCAT GCGTAACCGC AGGGATGCAG ATGCCTTTGT GCAGCACATA GACCCGTCAG CAGGAAAAGT AATGATTGTA GGCGGCGGAC TGCTGGGTAT TGAATTAGCT GCTTCACTAA GAGAAATGGA TATAGAAGTC GCTGTATTAC AGCGTACCTC TAAACTGATG GACCGACAGC TGGATGCCCT GGGCAGCCAG CTGTTGTATG AAGAACTGAC GGATCGCGGC ATAGAAATCT TATACAATGA TGAAATAGAA CGCTTTACTG GTCTGAATAA ACTGGATGGT ATCCGGCTGA AAAGCGGCCG GCAGGTAACT TGTCAGGCAG TAGTCATGTC TATCGGTACC GTTCCGAACA TAGAACTGGC CAAGGCATCT TCTTTATTGT GCAAGCGTGG TGTGATCGTC AATGAATACC TCATGACCAG CGATCCGGCT ATCTATGCCA TCGGAGAAAT CGCTGAATTC AATGGTACGC TCTTTGGCAT CACAGCAGCA GCAGAACAAC AGGCTGCAGT AGTGGCCCGT CATATGGCGG GAGATCTTAC CGGTTATTAC CAGGGTTCCC TGTTTATGAA CATCCTCAAG ATGCATGGCA CAGACCTTTG TTCACTGGGA ATGATAGAAA CACCTGCGGA CCCGGCTTAC GAAGAAGTCG TGTTCATTGA TAAATCCAAA CGTTATTATA AGAAGTGCGT CATCCACAAT GACAGACTGG TAGGCGCTAT CCTGATTGGT GACAAATCAG AGTTCCTGGA GTTCAGGGAT CTGATCGCCA ACAAAATAGA GCTCTCTGAG AAACGACTGG AACTATTACG CTCAGGCAAG AAAGCCGCGC CGGTGCTCGG TAAGCTTGTT TGCAGCTGCG GTAGTGTGGG AGAAGGTAAT ATCTGTGAGA AGATCAGAGA AGGTAGTCAT ACACTGGAAG ACGTCTGTAA AGCATCCGGC GCCGGTATGG GTTGCGGTAG CTGCCGGCCG GAGATCAAGG CGATCCTGGA GAAGGAAATG CCCCTCAAGA AGAAAGAAAG AGCCGCACTA GCCGCACTTA TTGAAATTAA CAATTAG
|
Protein sequence | MTGNHQHNKL PAGSYRSTCC YCGVGCGIVV NRDRQGKITV EGDKDHPVNK GMLCSKGMNL HYTVMDTSDR LYYPEMRYHR QMPRQRVSWD QALERTAAVF KQMIEQYGPD SVAFYASGQC LTEEYYVVNK LIKGFIGSNN IDTNSRLCMS SAVAAYKLSL GEDSVPGCYD DIEQTDCIFV AGANPAWCHP ILWRRIEAAK EKNPHMKIIV SDPRVTQSCA IADIHLQLMP GTDIVLHHAI GRLLIEAGHI DHDFIQQHTE GFSKYRDTVM ERSISSAAAI CGITEDLIYE AAALLGNVRS FMTMWTMGLN QSAVGVNKNL SLINLNLITG KIGKPGCGPF SLTGQPNAMG GREVGGLSNM LPAHRVLDNP AHRKEVEDFW GGTKISDKPG LTATEMFEAL NDGRLKAIWI MCTNPLVSLP DARMAEAALQ KAKFVVVQEI SNKPETVRYA DVVLPAAAWT EKEGTMTNAE RRVTYLQRVN EAPGEALPDA EIICRFAQKM GFKGFDYTGP ADIYAEHSRL TAGTNIDVSG VDYKVLKDKR SLQWPYPAGT TGPGTPRLFT DHHFYTSSTK AIIHSFPDDN RSAPPHPQFP LILTTGRIRD QWHTMSKTGK VSKLKQHIPA PLLEIHPEDA RERHIKEADI VEIFSENGTV RVKAQLSTSI KKGVVFLPMH WGKILDNDLN RANNLTHRLV DKISKQPDLK YTAVQVQLYR KPQQRIIIIG AGAGACGFVK SYRELNTTDT ITVFSKEDQP FYNRVMLPDY ISGTQQWQQL VKMTDDEESM LDIILHRGVS IEKIDREQKT VTDSKGRVHE YDVLILGMGS RAATLKDTPA LPGIFTMRNR RDADAFVQHI DPSAGKVMIV GGGLLGIELA ASLREMDIEV AVLQRTSKLM DRQLDALGSQ LLYEELTDRG IEILYNDEIE RFTGLNKLDG IRLKSGRQVT CQAVVMSIGT VPNIELAKAS SLLCKRGVIV NEYLMTSDPA IYAIGEIAEF NGTLFGITAA AEQQAAVVAR HMAGDLTGYY QGSLFMNILK MHGTDLCSLG MIETPADPAY EEVVFIDKSK RYYKKCVIHN DRLVGAILIG DKSEFLEFRD LIANKIELSE KRLELLRSGK KAAPVLGKLV CSCGSVGEGN ICEKIREGSH TLEDVCKASG AGMGCGSCRP EIKAILEKEM PLKKKERAAL AALIEINN
|
| |