Gene Cpin_2345 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_2345 
Symbol 
ID8358500 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp2887427 
End bp2887840 
Gene Length414 bp 
Protein Length137 aa 
Translation table11 
GC content45% 
IMG OID644964531 
Product3-dehydroquinate dehydratase, type II 
Protein accessionYP_003122037 
Protein GI256421384 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0757] 3-dehydroquinate dehydratase II 
TIGRFAM ID[TIGR01088] 3-dehydroquinate dehydratase, type II 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.660798 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.653044 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGATAG CGATTATCAA CGGACCTAAT TTAAACCTCC TCGGAAAGCG GGAGCCTGGT 
ATCTATGGAA ATGAGTCTTT CGAGTCTTAT TTTGAAAGGC TGAAAGCCCA ATATCCCGAT
GTGCAGCTTA CTTATTTCCA GAGCAATATC GAAGGTGAAA TGATCAATCA TCTGCACGAA
ATAGGTTTTT CCTATGATGG CATCCTGCTC AATGCAGGCG GTTATACACA TACCTCTGTA
GCCCTGCGGG ATGCGATTTC CGCTGTAAAA ACACCGGTAC TGGAAATTCA CATCAGTAAT
ATTCACGCCA GGGAAGAATT CCGTCATAAG AGCATGATCG CGCCTGTTTG CGTAGGTAGC
ATCTGCGGAC TGGGAATGAA AGGTTATGCA CTGGGCATTG CTTATTTCCT TTGA
 
Protein sequence
MQIAIINGPN LNLLGKREPG IYGNESFESY FERLKAQYPD VQLTYFQSNI EGEMINHLHE 
IGFSYDGILL NAGGYTHTSV ALRDAISAVK TPVLEIHISN IHAREEFRHK SMIAPVCVGS
ICGLGMKGYA LGIAYFL