Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_2339 |
Symbol | |
ID | 8358494 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | - |
Start bp | 2882963 |
End bp | 2883709 |
Gene Length | 747 bp |
Protein Length | 248 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 644964525 |
Product | glycosyl transferase family 2 |
Protein accession | YP_003122031 |
Protein GI | 256421378 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0463] Glycosyltransferases involved in cell wall biogenesis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.231367 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.416225 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGGAAAAGC TCGTCATAAT TCCCACGTAC AATGAGAAGG ATAACATCCG CAACATCATT GACGCGGTTT TTGCCCTGCG ACAAAACTTT CATATACTGA TCGTGGACGA CGGTTCGCCC GATGGCACCG GTAATATTGT TAGGAATTTG CAGCAGTCCC ACTCCGGCGA ATTATTCCTG GTAGAAAGAA GTGGCAAACA GGGCTTAGGC ACCGCCTATA TCCATGGCTT CAAATGGGCT CTTGAAAAGG GATATCAGTA CATTTTTGAA ATGGACGCTG ATTTCTCTCA CAGTCCGGCT GACCTGAACA GGCTCTATGA TGCCTGTGCG AAGGAAGGTG GCGATGTGTC TGTCGGTTCC CGCTATGTAA AAGGTGGTAA AACCGAAAAC TGGCCATGGG ACAGAGCTGT GCTCTCCTAC GGTGCCTCTG TGTACGTACG TTTTGTTACC TGGATAAGGG TAAAAGACGC TACTGCCGGC TTCGTCTGCT ATAAAAGACA GGTATTGGAA GCCATTAACC TGGATGCTAT CCGGTTTGTG GGCTATGCCT TTCAGATAGA AATGAAATTC ACGGCCTGGA AGTTAGGTTT CAAAATCAAA GAAGTACCTA TCACTTTCAA AGACCGTAAA GAAGGATATT CCAAAATGAG TAAAGGCATC ATCAAAGAAG GTGTCCTGGG AGTACTCAAA ATTCAATGGG AAAGCCTGTT CCGCAAGTAT GAAAGACGCG TAAGAAATAG CGAATAA
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Protein sequence | MEKLVIIPTY NEKDNIRNII DAVFALRQNF HILIVDDGSP DGTGNIVRNL QQSHSGELFL VERSGKQGLG TAYIHGFKWA LEKGYQYIFE MDADFSHSPA DLNRLYDACA KEGGDVSVGS RYVKGGKTEN WPWDRAVLSY GASVYVRFVT WIRVKDATAG FVCYKRQVLE AINLDAIRFV GYAFQIEMKF TAWKLGFKIK EVPITFKDRK EGYSKMSKGI IKEGVLGVLK IQWESLFRKY ERRVRNSE
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