Gene Cpin_2336 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_2336 
Symbol 
ID8358491 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp2877778 
End bp2878602 
Gene Length825 bp 
Protein Length274 aa 
Translation table11 
GC content46% 
IMG OID644964522 
Producthypothetical protein 
Protein accessionYP_003122028 
Protein GI256421375 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.429257 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATTTCC GTATCTACCA ACCGGCAACT TCGCTGGCAC CTTATGTTAA GCAGTATTAT 
CATTTACAGA GCACGAATTC CGGACTTATT AATCTGCCGC AGAATCTTTT TTCTCTCGGA
GACCTCTATA TGGTTTTCCT GCAGGAAGGA GAAGTGATTT TCCAGCCAAC ACAACATGCA
TCCTTTACAT TGCCTGAGGC ATCTGTAGTG GGACACTTTA CCTGTCATCA TCAGATCATG
GTGAAAGGAC CGGTAAAAAT GACGGTGATA CAGCTGAATG CATATGGTTG TTATAAACTG
GCGGGACTGG ATATGTCCTC TTTCAACAAC TACTTCCGCG ACCTGCTGAA GCAGGATCGT
GAATGCTGGA CAGAGCTGGC CGGAACGATT GCAGCACACA ACGACATTAC TACCCTGGAT
GCAGTACTGG ACAATGCGTT TACCAACATG ATGTGTGGAC AATCACACAA TCTGAAACAG
GTAGATGAGA TTGCAGACTA CATACTTAGC ACACAGGGAT ATACGAATAT TGAGTGGTTG
ACGAAGAAAT TCAAACTTTC CCGTCATACC ATGGAGCGTA AGTTCATGGA GGTGATTGGT
CTGACGCCGC AGTTATATGC CCGTATGCTG CGTTTCAGAG ATGCGATGCG TCACATGCAG
CGGATGAATG TAGAAGAGTG GCAGACGTTT ATCACAAATA ACGATTATTA CAGCCAGGCT
TTATTTATAC AAGACTTCCT GTTTTTCAAA GGCGAAGTTC CGGTACTGAA CCAGGAGACA
GCTATCGCAC AAATGCCGGT AGCGCGCCCT GTAGCCGTGG CCTAA
 
Protein sequence
MNFRIYQPAT SLAPYVKQYY HLQSTNSGLI NLPQNLFSLG DLYMVFLQEG EVIFQPTQHA 
SFTLPEASVV GHFTCHHQIM VKGPVKMTVI QLNAYGCYKL AGLDMSSFNN YFRDLLKQDR
ECWTELAGTI AAHNDITTLD AVLDNAFTNM MCGQSHNLKQ VDEIADYILS TQGYTNIEWL
TKKFKLSRHT MERKFMEVIG LTPQLYARML RFRDAMRHMQ RMNVEEWQTF ITNNDYYSQA
LFIQDFLFFK GEVPVLNQET AIAQMPVARP VAVA