Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_2336 |
Symbol | |
ID | 8358491 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | - |
Start bp | 2877778 |
End bp | 2878602 |
Gene Length | 825 bp |
Protein Length | 274 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 644964522 |
Product | hypothetical protein |
Protein accession | YP_003122028 |
Protein GI | 256421375 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.429257 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAATTTCC GTATCTACCA ACCGGCAACT TCGCTGGCAC CTTATGTTAA GCAGTATTAT CATTTACAGA GCACGAATTC CGGACTTATT AATCTGCCGC AGAATCTTTT TTCTCTCGGA GACCTCTATA TGGTTTTCCT GCAGGAAGGA GAAGTGATTT TCCAGCCAAC ACAACATGCA TCCTTTACAT TGCCTGAGGC ATCTGTAGTG GGACACTTTA CCTGTCATCA TCAGATCATG GTGAAAGGAC CGGTAAAAAT GACGGTGATA CAGCTGAATG CATATGGTTG TTATAAACTG GCGGGACTGG ATATGTCCTC TTTCAACAAC TACTTCCGCG ACCTGCTGAA GCAGGATCGT GAATGCTGGA CAGAGCTGGC CGGAACGATT GCAGCACACA ACGACATTAC TACCCTGGAT GCAGTACTGG ACAATGCGTT TACCAACATG ATGTGTGGAC AATCACACAA TCTGAAACAG GTAGATGAGA TTGCAGACTA CATACTTAGC ACACAGGGAT ATACGAATAT TGAGTGGTTG ACGAAGAAAT TCAAACTTTC CCGTCATACC ATGGAGCGTA AGTTCATGGA GGTGATTGGT CTGACGCCGC AGTTATATGC CCGTATGCTG CGTTTCAGAG ATGCGATGCG TCACATGCAG CGGATGAATG TAGAAGAGTG GCAGACGTTT ATCACAAATA ACGATTATTA CAGCCAGGCT TTATTTATAC AAGACTTCCT GTTTTTCAAA GGCGAAGTTC CGGTACTGAA CCAGGAGACA GCTATCGCAC AAATGCCGGT AGCGCGCCCT GTAGCCGTGG CCTAA
|
Protein sequence | MNFRIYQPAT SLAPYVKQYY HLQSTNSGLI NLPQNLFSLG DLYMVFLQEG EVIFQPTQHA SFTLPEASVV GHFTCHHQIM VKGPVKMTVI QLNAYGCYKL AGLDMSSFNN YFRDLLKQDR ECWTELAGTI AAHNDITTLD AVLDNAFTNM MCGQSHNLKQ VDEIADYILS TQGYTNIEWL TKKFKLSRHT MERKFMEVIG LTPQLYARML RFRDAMRHMQ RMNVEEWQTF ITNNDYYSQA LFIQDFLFFK GEVPVLNQET AIAQMPVARP VAVA
|
| |