Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_2295 |
Symbol | |
ID | 8358450 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 2827215 |
End bp | 2827697 |
Gene Length | 483 bp |
Protein Length | 160 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 644964481 |
Product | hypothetical protein |
Protein accession | YP_003121987 |
Protein GI | 256421334 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.0000219695 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 0.82539 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAGTC TTATCATAGC AACCACTATA TTATTCGCTA CTTTCTCTGC ACAGGCTGCA AATCCCGCAT TATCTAAATT GTTATCACTT TACTACGACA TAAAGAATGC ACTGGTGAGC AGTGACGCTA CTACGGCAAA CGCTAAAGCG GCTGAATTTG TAAAAGCCAT CGCTGGTGTG GATATGCACG CATTATCCGC AGCAGAACAT GAAGCGTTTA TGCCCTTGCA GGAAAAACTG ACTGCGGATG CCAGCGCTAT TGCTGCCACC ACAGACCTGA ATAAACAACG CGAACAATTC AAATCTTTCT CCAATAATTT CTTCACACTG GCCAAAACCA CTAAGCTCTC AGATACTCCG GTGTACCAGC AGTACTGCCC TATGCAGAAA AGCTACTGGC TGAGTAATGA AGCTGCGGTA AAAAATCCTT ACTACGGCAA GCAGATGCTT ACCTGCGGAA AAGTAACCGA GACGCTGAAA TAA
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Protein sequence | MKSLIIATTI LFATFSAQAA NPALSKLLSL YYDIKNALVS SDATTANAKA AEFVKAIAGV DMHALSAAEH EAFMPLQEKL TADASAIAAT TDLNKQREQF KSFSNNFFTL AKTTKLSDTP VYQQYCPMQK SYWLSNEAAV KNPYYGKQML TCGKVTETLK
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