| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_2281 |
|---|
| Symbol | |
|---|
| ID | 8358436 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chitinophaga pinensis DSM 2588 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013132 |
|---|
| Strand | - |
|---|
| Start bp | 2812044 |
|---|
| End bp | 2813480 |
|---|
| Gene Length | 1437 bp |
|---|
| Protein Length | 478 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 644964467 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003121973 |
|---|
| Protein GI | 256421320 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.000175993 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATAGTA TCTATAACTT ACTTGTCAGC AGTAATATCT ATGTAGAGAT CTTTAAGGAA
ACCATGCCAC TGGTGATTGC CGGCGCCTTG CTGCACCTGC ATTACAAAGG GCGTATTACT
GCACTGGAAG CCTTATTGTA TGCTTTTTCT ACAGAGGCGT ATACGATGCT TAGAATCGGA
CCTACTTTTA CGGCAACGTT CTTTGTGAGT GTCGCGTTTA CAGTTGAACA GCTACATTAT
CTTATCAAAG GACAGATCTT CATTAACCGG CGATATCTGT TATTACTTGT ACTGCCTGCA
CTCTCCAGTC TGGTGATATT TCTGATCGTG CAGCTATATA AAGATCCGTT CTATTATCCC
CCTGGCAAAC AGAATGACTT CTATCTGCGA CCGATCTACT TTTATATCAA AACATACTTA
CCACTATTTG CCATAGGTGC TAAACTGTTA CAGGATAAGG AACAGCTGTC TTTCGAGTAT
TATACAGGCG TGATGAAAAA GATCGCTAAG TTCTCTTTTG TCATTGCCGG ACTACAGATC
TTCTGTCAGC TTATACTGCG AAACGAAACA ATGGGAGAAC TCATCGGTTT ACAACACCGG
TATATGGTGG AGTCTTCCGG ATCTGCTTTC GGGATGCGTG TGCAGGCTTT GTTTGGAGAA
CCAAAAGTAT TCAGCGCTTT CCTTTCGGTA TCTATTCCTC TTTTCATACG TGATAAAGAA
TACCGGCTGG CCGCATTGAG TATCCTGATG GGTTTACTCA CCGTATCACA AACCTTCTGG
ATCAATATGC TATCAGCAGG AATTACTTTC CTGGTAATGG GACGCATGCC ATCTACCCGC
ATGAAGATAG CTGGTACACT AGGCATTATC ATCAGCCTGT TTCTTATCAT CAATGAATCA
AAAGACTATT TCATCAAACT GTATGCAAAA AATCAGAATA GCGCAATGTA TCAGCTGGTA
TTTAAAAGAT CCGTATACAG GTATGATAAT GAGATCTGGC AGAAAGACAA TGTTGTGTTG
GGGATGCCTT TGCAACGTGA CATGGAACTA CCGGTAGTAG ACTTCTTCAA AGATCAGCCC
TATCTGCTGT TATCAGGATA CGGAGCGGGC AATAGTACGT TTATTCCTGC ACAGTATTTC
TTTGGACAGA TGAACTATGA GAACAGGCTC AATGGTGTAG GAGGACATAA TCTCAATATG
CGATGGTTTT ACATACTGGC TGAATTTGGC TTCTTCTCGC TGATCATTTT CTTTTTCATA
CTCACACATA CGCGGAAGGA TATCCCTGTA TTTCAAAGCA GTTACTTTGC TTTTATATGG
GTCTGTTTTT TCTTCAGTCA GATCGATCTT TTTCTTATTG TCACGGCACT CTTATGTGCA
CATGATGAAA ATGAATCACC GGCGCCGGGT ATATATCAAC TGAAACATTC TTATTAG
|
|---|
| Protein sequence | MDSIYNLLVS SNIYVEIFKE TMPLVIAGAL LHLHYKGRIT ALEALLYAFS TEAYTMLRIG
PTFTATFFVS VAFTVEQLHY LIKGQIFINR RYLLLLVLPA LSSLVIFLIV QLYKDPFYYP
PGKQNDFYLR PIYFYIKTYL PLFAIGAKLL QDKEQLSFEY YTGVMKKIAK FSFVIAGLQI
FCQLILRNET MGELIGLQHR YMVESSGSAF GMRVQALFGE PKVFSAFLSV SIPLFIRDKE
YRLAALSILM GLLTVSQTFW INMLSAGITF LVMGRMPSTR MKIAGTLGII ISLFLIINES
KDYFIKLYAK NQNSAMYQLV FKRSVYRYDN EIWQKDNVVL GMPLQRDMEL PVVDFFKDQP
YLLLSGYGAG NSTFIPAQYF FGQMNYENRL NGVGGHNLNM RWFYILAEFG FFSLIIFFFI
LTHTRKDIPV FQSSYFAFIW VCFFFSQIDL FLIVTALLCA HDENESPAPG IYQLKHSY
|
|---|
| |