| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_2275 |
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| Symbol | |
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| ID | 8358430 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 2803548 |
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| End bp | 2806184 |
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| Gene Length | 2637 bp |
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| Protein Length | 878 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 644964461 |
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| Product | glycoside hydrolase family 2 sugar binding |
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| Protein accession | YP_003121967 |
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| Protein GI | 256421314 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3250] Beta-galactosidase/beta-glucuronidase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACATTA TGGTTCGGAA ATTACTGAAT GCGACAGGTC TTTTACTAGC ACCTTTTTTA
CCATTGGCTG CACAAAGCCA ATATGAATTG AACAGTGGCT GGCAATGTAA TAATATTGCA
AAAGTGACTG TAAAGGGAGA AGCGCTTTCT GCGCCGTCCT ACAAACTTTC AGGCTGGATG
CCGGCAACAG TGCCCGGAAC AGTGCTGACA ACATTACTGA ACAATAAACT GGTGCCGGAC
CCTTTCTACG GCATGAACAA TGAGCGTATT CCGGACATTT ACAACACCGG AAAAGACCAC
TACACTTATT GGTTTGTAAA GGATTTTGCA GAACAGAAAC CCGGTGCTGA TGGCCAGGTA
TGGTTGCACT TCAGAGGTGT GAACGACGGT TGCGATATCT ATGTGAACGG TCATCGCCTC
AATCCGAACA CACATTTCGG TACTTATCTC AGACATTCTT ATAATATCAC CCAGTGGCTG
GCAAAGGATG GCAAGAACCG TCTGGCAGTA GTAGTATATC CACCTGCCGT TGTAGGTAAT
CCTAACGGTG GCCAGGGTGG CGATGGTACT ATTGCGAAGA ATGTTGGTCC TCAGTACACT
GCTGGTTGGG ACTGGATTCA GCCAATGCGT GACCGTAACA CCGGTATCTG GGATAAAGTG
ACCATTGAGA AAACAGGCGC TGTACATATA AAAGATCCGC AGGTGATTAC TAAAGTAGCG
GGTGTAAGGT TGCCGGAAGG CCCACAGGCG CCGGCTACCG TAATGGTAAA AGCTACATTG
GAGAATGCGA CCGCTAAAAG CATAGAAGGT ACATTGCGTT ATAAACTGGC AGGTAATACC
ATTTCACAGA AGGTAACACT GGCAGCGAAT GCAACGACTA CCGTGCAATT GCCTGACCTG
GAACTGAAAG AGCCTAAACT CTGGTGGCCA AGTGGTTACG GTCCGCAGCA ACTATATAAC
CTGCAACTGG AGTTCGCAGA AAATGCAGGT GTGGACGACG TGGAAGAGGT CAACTTCGGT
GTAAGAGAGA TCCAAACCTA CTGGAACTCA CACACTAACA GCCGTGAGAT TGCTGTAAAT
GGTCAGAAGA TCTTTATCAA GGGTGGTAAC TGGATCACTT CCGATGCAAT GTTCCGTTTC
AGCAAAGAGC GTTATGATGC CGAAGTACGT TTCCACAGGG ATATGAACCT GAACCTGATC
CGCATCTGGG GTGGTAGTCT GACGGAAAGA CCAGAGTTCT ACGAAGCCTG TGATAAATAT
GGTATGCTGG TATTCCAGGA TTTCTGGATG TCAGGCGACT GTAACGGTAG ATGGGTAGAC
CCGATGAAAA AAGAAGACCA ATGGACACGT CGTCGTTATC CTGATGACCA CAACCTGTTC
GTAGAATCTG TGGCTGACCA GATCAAAATG CTGCGTAACC ATGCATCCCT GGCTTTCTGG
TGTGGTGGTA ATGAGATCAC GCCTCCGGCT GATATCCTCT CCGCAATCAA GGATTCCCTG
CTGCCTTCAC TGGATAATAC CCGTTTCTTC TTCCATTACT CCAATACCGA TAGTATGTCT
TACAACAACC TGGGTGGTAA TGGCGATGGT CCTTATAATA TACAACCACT CTCCGTTTTC
TGGAACGAAA GGACATTCCC TTTCAACTCA GAAGTAGGTT CCGTAGGTGT AGGTGATTAT
GAATCTCTGG AAAGATTTAT CCCAGTGGCA AACATGATCG CGCCTGAGAA TAAAAAAGGC
GGTGTGGATT CAGTATGGGA CTATCATAAA TATATCCCTT ACTTCAACCA GGTAGATCCA
TATGGTAAGC CGAAAGACGT AAAAGACTTC GCTAACAAGG CCCAGCTGGT GAACTATGAC
CAGTACCGTG CATTGATGGA AGGTTTCAGC GCGCATATGT GGGATTGGTA TACAGGGGTG
ATTATCTGGA AAACACAAAA TCCATGGACC GCACTGCGTG GTCAGATGTA TGATTACTAC
CTCGATCCAA ACGCCTGTCT GTATGGTAAC CGTACCGGTG GCGCGCCACT GCACGTAATG
TGTAACCCGA CCGACGGTAA CATCTTCACT GTCAATAATA CTTTTAAATA TTATACAGAT
GTAATGCTGC AACTGACAGC ATATGATATG GAAGGGAAGA GCAGACAGCT TACCCAGGTA
TTTACTGAGA TTAGTCCGAA GACTGTACAG AAGTACCTGT CTGTGAAGCA TGGTCTGGAT
AAAATGGCCG CTAAAGAAGG TATATTCCTG TCTTTACGCC TGCTGGACAA AGACCAGAAA
GTAATAGATG ATAACCTGTA CTGGTTCCCT GACAGCACCG GTAACTATTC CGGTCTGCAG
AAAATGAAGG CTGCTAAAGT ACAGATCGTA GCACAAAAGG CTGCTAATGA TAGTATTACG
GTGAAGATCA GCAATCCTGC CAATGGTCCG GTGGCATTCT TTAACCGCGT ATCACTGGTG
GATAGCAAAA CAAAGAAACG TATCCTGCCT GTGTTCTATA ATGATAACTA TGTGTCTGTA
TTACCGGGAG AAGAGAAGCT GGTGACTATC AGTGGAGAAG CAATCGGTAA AAATAGTAAT
GCCGTGGTAA CGGTTTCAGG ATGGAATCTG GCAGAACAAA CTATCAGCGT TAAATAG
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| Protein sequence | MHIMVRKLLN ATGLLLAPFL PLAAQSQYEL NSGWQCNNIA KVTVKGEALS APSYKLSGWM
PATVPGTVLT TLLNNKLVPD PFYGMNNERI PDIYNTGKDH YTYWFVKDFA EQKPGADGQV
WLHFRGVNDG CDIYVNGHRL NPNTHFGTYL RHSYNITQWL AKDGKNRLAV VVYPPAVVGN
PNGGQGGDGT IAKNVGPQYT AGWDWIQPMR DRNTGIWDKV TIEKTGAVHI KDPQVITKVA
GVRLPEGPQA PATVMVKATL ENATAKSIEG TLRYKLAGNT ISQKVTLAAN ATTTVQLPDL
ELKEPKLWWP SGYGPQQLYN LQLEFAENAG VDDVEEVNFG VREIQTYWNS HTNSREIAVN
GQKIFIKGGN WITSDAMFRF SKERYDAEVR FHRDMNLNLI RIWGGSLTER PEFYEACDKY
GMLVFQDFWM SGDCNGRWVD PMKKEDQWTR RRYPDDHNLF VESVADQIKM LRNHASLAFW
CGGNEITPPA DILSAIKDSL LPSLDNTRFF FHYSNTDSMS YNNLGGNGDG PYNIQPLSVF
WNERTFPFNS EVGSVGVGDY ESLERFIPVA NMIAPENKKG GVDSVWDYHK YIPYFNQVDP
YGKPKDVKDF ANKAQLVNYD QYRALMEGFS AHMWDWYTGV IIWKTQNPWT ALRGQMYDYY
LDPNACLYGN RTGGAPLHVM CNPTDGNIFT VNNTFKYYTD VMLQLTAYDM EGKSRQLTQV
FTEISPKTVQ KYLSVKHGLD KMAAKEGIFL SLRLLDKDQK VIDDNLYWFP DSTGNYSGLQ
KMKAAKVQIV AQKAANDSIT VKISNPANGP VAFFNRVSLV DSKTKKRILP VFYNDNYVSV
LPGEEKLVTI SGEAIGKNSN AVVTVSGWNL AEQTISVK
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