| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_2257 |
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| Symbol | |
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| ID | 8358412 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 2781396 |
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| End bp | 2784884 |
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| Gene Length | 3489 bp |
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| Protein Length | 1162 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 644964443 |
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| Product | GAF sensor hybrid histidine kinase |
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| Protein accession | YP_003121949 |
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| Protein GI | 256421296 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCAGCG ACTATTCCCT ATATTTGTCC GGTCGTATTG TCATAATCCT ATTTGCACGC
TTACCAGATA TGAAAAATAC CTTAAAACTT CGTCTGTTTA TTGGTTTCGC TTTAGCGCTT
ATTTGTGTGA CCGCCGGGGG TATCTTTTCA TATGTTACTT TCAACCATCA GCGTACTGAG
GGAAAGTGGG TAGAGCATTC CTACGAGGTC ATTACCACTG CACAGCGCCT GAACAGGTAT
ATATATGAGA TAGAGTCAGC CGGGGCTGCT TACAGAAGTA CCCGTGTCAA CAAATTCCTG
CAACCTTATT TTCAGACTAG TCCTAAGGTA CTGCCGCTGG CGGGCGACCT GCGGAAGCTG
GTAGCCGATA ATGCGCCCCA GTACAGGAAA GCGGGTAGAC TTGAAAATAG TGTGATATCG
TTGCTGAACT ATTGGGAAGG TCTACGCAGG GATACAGTCA ATATGTTCGG TAATCCGATG
AAGGTGACAC AGGAAGAGCG GCAGCACCTG GATACAGTAC ATAACCAGAT TACAGAGATT
ATATCGGATG AGCGCTTTCT GCTGATCAGC AGGACAGCTT CCAACGAAGC CTCTGTTGGC
AGAGCGATGA CAATGCTGAT CGTCAATACG ATCTTTATTC TGCTGATAGC AGCTGCCCTG
ATGATCGTTT CTTTCCGGGA GTTGTCCAGC AGGATGAAAA TCCAGCAGGA GTTACGCCGC
CGCCTGAAAG ATGTGGAAAA TCTGAACCAG CAGACGGGCG AAAAGAACTG GTTACTGACA
GGGGTAGCTC ATATTAATGA CAGCCTGAGC GGAGAAATGG AGACACGCGT GATGGTTACC
CGCTGTCTAG AGGTCATGGT AAAGTACCTG AAGGTACCGG CTGGTGCTTT TTATAGATTT
GACAAGGATG AAACGATGTT GAGGCTTTGT GCCGGTATTG CCTTACCTGC AAAAGTTAAA
AAAGAATATG TTTTAGGGGA AGGAGTGACC GGCCATGCCG CTACCAAACG CGAGATCAGT
ACCATAGAAC GTGTGCCGGC TACTTACTGG AATATCGAAA CAAGTGGCGG CAGTGCACAA
CCAGGCGCGA TTATCTGCCT GCCCCTGTGG CATAATGAAG AACTGATGGG CGTGATGGAG
CTGGTGACTT TTGGAGATAT TTACCCAGGT ACACTGGACC TGCTGAAGAC GACCTCTCAT
GCCATCGCCG TAGCGATCAA TGGAGCAGAA GCGAGAGCCA GCGTATTACA ACTACTGGAG
CGGGTACAGG AGCAGAAAGA GATTCTCGAA ACCCAGCAGG AGGAACTGAG ACAATCCAAT
GAAGAACTGA CCCGTCAGTC AGAAATATTA CAGGCATCTG AAGAAGAGCT CCGTGTACAG
GAGGAAGAAC TGCGTCAGAT CAACGACGAG ATGACGGTAC AGAATAAAGC ACTGGAGATT
GCGCGGCAGC AGCTGTCGCT GAAAGCGGAA GAACTGGAAC AGAGCAGCCG GTATAAATCG
GAATTCCTGG CCAATATGTC GCATGAATTG CGAACACCGC TGAATAGCGT CTTGATACTG
GCACGGTTAC TGGAAGAGAA TAAAGACCGT AATCTGAGTA GCAAGCAGGT GGATTATGCC
GGTATTATCC ACAAATCCGG TTCAGACCTG CTGAAACTGA TCAATGATAT TCTTGACCTT
TCTAAGATAG AGGCCGGTAA AGTAGAAATG CAGATAGAAC CGGTGTCTGT CAGTGCTATG
GTGAGTGACC TGGAACAATT GTTCAGGGTC GTGGCTGATG AAAAAAGTAT ACATTTCTCT
ACAGAAATAG CGGCGGGTGT GCCTGCCACT GTTCAGACTG ACCGGCAGCG CCTGGAACAG
GTGATCAAAA ACCTGTTATC CAATGCGTTT AAGTTTACGC CTAAAAACGG GAACATACAG
TTGCGTCTTA CGGCTGCAGC TGATGGGGTA TATATCGCGG TAAGTGATAA TGGTACAGGT
ATTCCGGTGG AGAAACAGCA GCTGATCTTC GAAGCTTTCC GCCAGGCAGA CGGGTCTACC
AGCCGTAAAT ACGGCGGTAC CGGTCTGGGA CTGTCCATCA GTAAGGAACT GATGAAACGA
CTCGGTGGAG AGATCCGGCT GGAAAGTAAG GAAGGACAGG GTAGTACTTT TACCGTTGTA
CTGAGAATGG ATGGACTTGC GCAGGTACAG CAAGCCGCAG AGAAACCGGT TATTCCGGCT
CCGCCGCCTG TAAAAGAAGT ACCTGTACCG ATACCGGTAA CAGTGATGCC GCCACCTGTT
ACGGAAGCGC CACAGGTGGA AGACGACAGG GACAAACTGA GTAAACAGGA TAAGCTGGTA
CTGATCATTG AAGACGATAT CAGTTTTGCA ACGATTCTGC GGGATTTTGC GAGAGAGAAA
GGGTATAAGA CAATTGTGGC TTTAAATGGA AATGATGGAC TGTTCTTTGC CCGTAAATAT
CTGCCGGCGG CTATATTACT GGATATGACC CTGCCGTTGA TAGATGGTAA CAGCATTCTG
AAGATTCTGA AGAGCAACGA AGATCTGCAA CATATACTGA TTCATGTGAT ATCAGCCGGT
GAGATCTCCT TACAGGTAAG AGACAAAGTA GAAGGCTATA CGCAGAAGCC GTTGCAGGTG
ACAGATATGG AGTCTGTATT CACCGGTATC AGTGATCGCT TACAGGCCCG GTTTAAAAAA
GTGCTGGTGG TATCAGATGG CGTATTGCTG CATCATCCGT CTTTGCAATC TATGAGTGAC
GAGCGGCATT TGCAGACGCA GTATTATCGT GTAAGCGATC TGGAGGCAGC AGGCAGGGAG
TTGGCGCAGA AGAGTTATGA TGCAGTGATA CTGGACGCAG GGACGAATAT AACAGAAGGT
CTGAGTAAAT TACACAAGCT CAGGCAGGCC ACATATAAAG GAATGCCTAT CATTGTTTAT
CTTGATCATG ATATTTCAGA AGCAGATGAA CTGCAACTGA AGAAGGAAGC AGCAGCTATT
GTCAGAAATT CTACGTTTTC GACAGACAGA CTAATGGATG AACTGGAGCT GTTCCTGTAC
AAATTACAGG AGACGACCCC TCAGCTGAAA GCAGAACTGT TAGCATCAGA AAACACACTG
TCAGGGCAAA AAATTCTGCT TGCAGATGAC GACATGCGTA ATGTTTTTTC TCTAAGTGCC
CTTCTGGGTG AACAGGGAAT TGACGTCATC ACAGCGGCAG ACGGTAAGGA GGCATTGGAA
CGGCTGGAAG AGCACAATGA CATACGACTG GTGCTTATGG ACATTATGAT GCCTGAAATG
GATGGTTATG AAGCGATGCG CAGGATCAGG GCAATTGGCC GTTATAAGTC ATTGCCGGTG
ATCGCACTCA CCGCTAAAGC CATGGCAGGC GACCGGGAAA AGTGTATCGC AGCAGGCGCT
TCCGACTATA TCGCCAAACC GATCGATAGC AGTAAACTAT TATCACTCAT GCGTGTGTGG
ATGGTGTAA
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| Protein sequence | MTSDYSLYLS GRIVIILFAR LPDMKNTLKL RLFIGFALAL ICVTAGGIFS YVTFNHQRTE
GKWVEHSYEV ITTAQRLNRY IYEIESAGAA YRSTRVNKFL QPYFQTSPKV LPLAGDLRKL
VADNAPQYRK AGRLENSVIS LLNYWEGLRR DTVNMFGNPM KVTQEERQHL DTVHNQITEI
ISDERFLLIS RTASNEASVG RAMTMLIVNT IFILLIAAAL MIVSFRELSS RMKIQQELRR
RLKDVENLNQ QTGEKNWLLT GVAHINDSLS GEMETRVMVT RCLEVMVKYL KVPAGAFYRF
DKDETMLRLC AGIALPAKVK KEYVLGEGVT GHAATKREIS TIERVPATYW NIETSGGSAQ
PGAIICLPLW HNEELMGVME LVTFGDIYPG TLDLLKTTSH AIAVAINGAE ARASVLQLLE
RVQEQKEILE TQQEELRQSN EELTRQSEIL QASEEELRVQ EEELRQINDE MTVQNKALEI
ARQQLSLKAE ELEQSSRYKS EFLANMSHEL RTPLNSVLIL ARLLEENKDR NLSSKQVDYA
GIIHKSGSDL LKLINDILDL SKIEAGKVEM QIEPVSVSAM VSDLEQLFRV VADEKSIHFS
TEIAAGVPAT VQTDRQRLEQ VIKNLLSNAF KFTPKNGNIQ LRLTAAADGV YIAVSDNGTG
IPVEKQQLIF EAFRQADGST SRKYGGTGLG LSISKELMKR LGGEIRLESK EGQGSTFTVV
LRMDGLAQVQ QAAEKPVIPA PPPVKEVPVP IPVTVMPPPV TEAPQVEDDR DKLSKQDKLV
LIIEDDISFA TILRDFAREK GYKTIVALNG NDGLFFARKY LPAAILLDMT LPLIDGNSIL
KILKSNEDLQ HILIHVISAG EISLQVRDKV EGYTQKPLQV TDMESVFTGI SDRLQARFKK
VLVVSDGVLL HHPSLQSMSD ERHLQTQYYR VSDLEAAGRE LAQKSYDAVI LDAGTNITEG
LSKLHKLRQA TYKGMPIIVY LDHDISEADE LQLKKEAAAI VRNSTFSTDR LMDELELFLY
KLQETTPQLK AELLASENTL SGQKILLADD DMRNVFSLSA LLGEQGIDVI TAADGKEALE
RLEEHNDIRL VLMDIMMPEM DGYEAMRRIR AIGRYKSLPV IALTAKAMAG DREKCIAAGA
SDYIAKPIDS SKLLSLMRVW MV
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