| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_2250 |
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| Symbol | |
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| ID | 8358405 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 2768414 |
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| End bp | 2770969 |
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| Gene Length | 2556 bp |
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| Protein Length | 851 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 644964436 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_003121942 |
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| Protein GI | 256421289 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGAAAAT CATTACTCTT CCTTATGCCA ATTTTACTTT TGGCCGGCAC GGCATTTTCT
CAGGATGCCG TTGTAGGCGT GATAAAAAAT GGTGAGGGAA CCTCAGTTGT GGGGGCAACT
GTAGTAATCA AGGGCACCAA TGTTCACGCT ATTGCAGATA CAAGCGGACG ATTCAGTATT
CCATTGCGGA GGGCGTTTCC CTTCACCCTG TTAATCAGTT CACTGGGATA TAAACTGGAG
GAAGTAAAAC TGACCAGCCT CCCTACAGGT CCGCTGACTA TCACCTTATC CAGCGATAAC
AGTCTGTCGG AAGTCGTGAT CTCTTCCCGC CGACGCCTGG AAACCGCGCA GCAGGTACCT
ATTCCGATCT CCGTAATCAG CGGTTCACTG GTTGCAGATG CCGGCGCCTT CAACGTTAAC
CGTCTGAAAG AGATTGTACC TACCGTACAA TTATATTCTT CCAATCCCCG GAATACGACC
CTGAATATCC GTGGTGTCGG ATCGACTTTT GGTCTGACAA ATGATGGTAT TGACCCGGGT
GTGGGTTTCT ATGTGGATGG CGTGTATTAT GCCCGTCCGG CAGCGACTAC GCTTGACTTT
ATTGATATAG AACAGGTAGA GGTATTACGC GGACCACAAG GTACGCTCTT CGGTAAAAAC
ACAACCGCAG GCGCCTTCAA TATCACGACA AGACAGCCTA GTTTTACCCC GGAAGCTAAT
TTCGAGGTAA GCTATGGCAA CTATGGATAT ATCCAGGCAA AAGCAGCCGT TTCAGGTCCG
CTCAGTAAGA AATTTGCCGC CCGCGTGTCC TTCTCCGGTA CACAGCGTGA TGGCACACTT
TATAATGTGG TGACGCAAAA ACATATCAAT GACCTCAATA ACCTGGGCTT ACGCGGGCAG
CTGTTATATA CGCCTTCAGA CAAAGTGAAG ATCACCCTGA CTGCGGACAA TTCCGAGCAA
CATCCGGAAG GCTATGCACA GGTGGTAGCA GGTGTAGCTC CCACCTTACG ACCTGCTTAC
AGACAGTTTA AACAGATCAT TGCTGACCTG AATTATAAAC TGCCCAGCGA GAATCCATTT
GACCGTCTGG TAGACCATAA TACGCCATGG CGCTCCGGTA ATGAACTGGG CGGCGTTGCA
CTGAATGTAG ACGCTAAAAT TGGCGGCGGT ACACTGACTT CCACTACCGC GTGGCGTTAC
TGGAACTGGG ATCCTTCAAA TGACAGGGAC TTTACCGGTC TGGCAGTATT ACAGTTATCA
CAAGCCACTT CCAAACATAA ACAATGGACG CAGGAAGTAC GTTATGCAGG TGACCTGACG
TCCCGCCTGA GCGGTGTTAT AGGTGTATTC GGCATCTGGC AGGACCTGAA AACAGATCCT
GCGCATATTG AAGAATCAGG AGATGCCCAG TGGCGTTTCT CCCAGAGTTC AACCAGCGAG
TTATGGGCGA CACCGGGCTT GTTTGATGGT TATGGTATAA AAACGGTATC CCGTCTGAAG
ACTTTCGGCG GTGCTGTATT TGGTCAACTG GACTGGGCGA TCACCGATCA GATACATGTA
TTACCAGGTC TGCGTTACAA CTATGACAAG AAAAAAGTAG ACTATGACCG TAAGACATAT
GGCGGTTTAC AGACAGACGA TCCGGATCTG ATCGCACTGA AAAATATTGT ATATACCAAT
CAGACCTTCA ACGCGGATGT AGATGAAAGC AATGTTTCCG GTCAGCTGAC ACTTGCTTAT
AAACCGACAA AAGCCATCAA CGCATTTGCG ACCTATTCCA CCAGTTATAA ACCAATCGGT
GTGAATCTCG GCGGCTTACC TACATCAGGC GGTAAAGTAA TGACGGAACT GGCCAGGATC
AATCCTGAAT CGGTAAAACA TTTTGAAGTA GGCGTTAAAA CATCTCCGGG CAAGAATGCC
ACTGCGAATA TCGTTTACCA CAGAACAGAT ATCAAAGACT ATCAGACGCA GGTACAGACC
GCAGAAGTGG GTGTAAACCG TGGTTACCTC GCCAATGCTG AAAAAGTAAG GGTGCAGGGA
GTGGAACTGG ATGCAAGTCT GAAGATACAT AGTGCAGTAT CCCTCTATGG TTCCCTTGCC
TACACAGATG GCAAATATGT GTCTTTTAAG AACGCGCCGG TACCATTGGA AGAAACAGGT
GGCTCTGCTG CCTTTAAAGA TATTTCCGGT GGAGAATTAC CAGGTATTTC AAAATGGGCA
GGTTCGATAG GTGGAGAGAT CGTTTCTAAT CCCGGTATCA TCCTGGGACA GAATGCCCGT
TTCTTTGTGG GTGCGGATGC ATATTTCCGC TCTTCTTTCT CTTCCAGTCC GTCACCCTCC
AAATACCTGA ATATTGACGG TTATACCTTG TTTAATGCCC GTGCAGGTTT CCGTGCACTG
AACGGACTGA CTATTTTTGT ATGGGGACGT AATCTGCTGA ATAAAGATTA TTTCGAGCAG
TTACTGCCAG CGGCAGGTAA TGCGGGTCAC TATGCGGCCG TATTAGGCGA TCCACGCACT
TATGGTGTAA CGATCCGTTA TTCTTATCAC CAGTAA
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| Protein sequence | MRKSLLFLMP ILLLAGTAFS QDAVVGVIKN GEGTSVVGAT VVIKGTNVHA IADTSGRFSI
PLRRAFPFTL LISSLGYKLE EVKLTSLPTG PLTITLSSDN SLSEVVISSR RRLETAQQVP
IPISVISGSL VADAGAFNVN RLKEIVPTVQ LYSSNPRNTT LNIRGVGSTF GLTNDGIDPG
VGFYVDGVYY ARPAATTLDF IDIEQVEVLR GPQGTLFGKN TTAGAFNITT RQPSFTPEAN
FEVSYGNYGY IQAKAAVSGP LSKKFAARVS FSGTQRDGTL YNVVTQKHIN DLNNLGLRGQ
LLYTPSDKVK ITLTADNSEQ HPEGYAQVVA GVAPTLRPAY RQFKQIIADL NYKLPSENPF
DRLVDHNTPW RSGNELGGVA LNVDAKIGGG TLTSTTAWRY WNWDPSNDRD FTGLAVLQLS
QATSKHKQWT QEVRYAGDLT SRLSGVIGVF GIWQDLKTDP AHIEESGDAQ WRFSQSSTSE
LWATPGLFDG YGIKTVSRLK TFGGAVFGQL DWAITDQIHV LPGLRYNYDK KKVDYDRKTY
GGLQTDDPDL IALKNIVYTN QTFNADVDES NVSGQLTLAY KPTKAINAFA TYSTSYKPIG
VNLGGLPTSG GKVMTELARI NPESVKHFEV GVKTSPGKNA TANIVYHRTD IKDYQTQVQT
AEVGVNRGYL ANAEKVRVQG VELDASLKIH SAVSLYGSLA YTDGKYVSFK NAPVPLEETG
GSAAFKDISG GELPGISKWA GSIGGEIVSN PGIILGQNAR FFVGADAYFR SSFSSSPSPS
KYLNIDGYTL FNARAGFRAL NGLTIFVWGR NLLNKDYFEQ LLPAAGNAGH YAAVLGDPRT
YGVTIRYSYH Q
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