Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_2239 |
Symbol | |
ID | 8358391 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | - |
Start bp | 2756892 |
End bp | 2757734 |
Gene Length | 843 bp |
Protein Length | 280 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 644964422 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_003121931 |
Protein GI | 256421278 |
COG category | [R] General function prediction only |
COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACACAC AAAGAAAAAC ATGGTTTGTA ACAGGCTGTT CGCAGGGTAT TGGTCTTGAA CTGGTGAATC AGTTACTTGC AGCAGGATAT AATGTAGCGG CAACCGGCCG TAACCTCAAT ACATTGAAAA AAGCGGTAGG CAATACCTCC GCACAGTTCC TCCCTTTACA GGTTGATCTG AATGATGAAA CAAGCATCGC CAAAGCGGTA GACGCCACGA TTAAACAGTT TACATCCATT GATGTACTGG TAAACAATGC CGGTTATGGT CTGATTGGCG GTATCGAAGA AACATCTGCG AAGGAAGCCC AGGCTATTTT TGATATCAAT GTATTTGGTT TGCTGAACGT AACCCGTGCC GTATTACCAC ATATGCGTGC AGCTGGCAGC GGTCGTATCT TCAATATCTC CAGTGTATTT GGCCTGATTG CAGGTGGTGG CTGGGGACTC TACTGTGGCA GTAAATTCGC TGTGGAAGGT ATATCTGAAG CATTGGCACA GGAAGTACAG CCATTCGGCA TCCAGGTAAC GATCATCGAA CCAGGATATG TACGTACAAA CTTCCTGAGC AGCGGTTCCA TTATTGTTCC GGAACATCCG ATCGCAGCAT ATAGCACTAT TCAGGAAGAA AAACGCAAAC ACAAAGAAGA GGTGCCTGGC ACACAGTTAG GCGATCCGGC TAAACTGGCG GCAGTAATAA TTGCTACCTC AACAGCTGCA GAAGCACCAT TACGTTTGCT GTTGGGTTCG GATGCCCTGC TGTTTGCAAA TTATAAGATA GATATGTTGC AACAAGGTAT TGCGGCTAAC CGCGAAGTGA CCTTGTCCAC CGACTTTAAA TAA
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Protein sequence | MDTQRKTWFV TGCSQGIGLE LVNQLLAAGY NVAATGRNLN TLKKAVGNTS AQFLPLQVDL NDETSIAKAV DATIKQFTSI DVLVNNAGYG LIGGIEETSA KEAQAIFDIN VFGLLNVTRA VLPHMRAAGS GRIFNISSVF GLIAGGGWGL YCGSKFAVEG ISEALAQEVQ PFGIQVTIIE PGYVRTNFLS SGSIIVPEHP IAAYSTIQEE KRKHKEEVPG TQLGDPAKLA AVIIATSTAA EAPLRLLLGS DALLFANYKI DMLQQGIAAN REVTLSTDFK
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