| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_2171 |
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| Symbol | |
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| ID | 8358323 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 2658945 |
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| End bp | 2662403 |
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| Gene Length | 3459 bp |
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| Protein Length | 1152 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 644964355 |
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| Product | Exodeoxyribonuclease V |
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| Protein accession | YP_003121864 |
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| Protein GI | 256421211 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1074] ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains) |
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| TIGRFAM ID | [TIGR00609] exodeoxyribonuclease V, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGAAC ATATCAACTA CCAGGATTTT AATGCGGCCA CCGTACCTCT GCAGGATAGT
AACCTGATAG AGGCCAGTGC CGGTACAGGA AAAACATATT CCATCGCCAT TCTCGTACTG
AGACTGGTGC TGGAGAATGG GCTTTCTATT AAAGAAATCC TGATGGTGAC CTTCACCAAA
GCAGCCGTAG CTGAACTGGA AGAACGTATC CGTTTATTTG TGCGTACTGC TTATAAGATC
AGCCAGGGAC AGGAAACCCG GGATGAAAAC ATCTTCCGGC TGGTAGAAGA AGCCGTAGAA
CGTAATGGCC TGGCCGCCGT ACAGCAACAG TTGAGAGATG CGGTATTGTT CCTGGATGAA
ACGGCCGTGC TGACTATTCA CAGCTTCTGT CAGAAGACCT TGAATGAGTT CGCCTTTGAA
ACAGACCAGT TGTTTGGCGC TGAGATGATC CAGGATACCA AAACCCTGAT AGCAGAAGAA
GTACAGAAGT TCTGGCGTAA ATATGTCACC ACCCTGCACA TCCGTTTGCT GGAAAAAGTA
TGGGAGCCGG ATATGATGGA GGGGATCAAT GTAGCCCTGA ATGAACATAT GGGCGGGAAG
CGTTATTATG CTTATCAACC TGGTAAGAGA TATGCCATCA AACAGAAGGA ACAGGAGGAA
TGGTTGCATC AGCTGGATGC AATAGATGAT AAGAAAGCGG CGGTTGAAAA AATCCTGATG
GATTATGTGA TCAATGAAAG AGAAACATTG AGGGGATTAT GCGAAGGAAA CAGGTATGCT
AAGACGGCAT TATTGCCTTG CATGGATGAT CCTGAATTAT TTATAAAGAC AGTAGCTGAC
AAAAGAAACA GCGCCAAATA TATCAGCACA TTGCTGCCTG ACATGCTGGC ACACATGGAC
GAGGTAGCCG TTGTGGATGA AGAACGGAAA GGGGTTGTAC AGCAGGTGAT CAGTCGTTTG
TATTGCTTTG CCATAGAAGA GATAGCGGCG GGTGTAAAAG GCTTTAAAAA GCGAAACAAC
CTGCTGAGTT ACGATGATAT GATCACCAAC CTGCATAAGT CACTGGTGGA CAGAAATAAC
CCGAAGCTGG AGGAAGTGCT GCGGGAGAAA TACAAGGCAG TATTTGTGGA TGAATTCCAG
GATACTGACA GGATGCAGTA CGAGATCTTT GAAAAAGCTT TCGGAGAAAG CACCATCCTG
TTTTATATCG GTGATCCCAA GCAAAGTATC TATGCCTGGC GTAAGGCGGA TATCTTTACC
TATTTCAAGG CCAGGGCCAG TGTACAGCAT GTATATGGTA TGAACCGTAA CTTCCGTTCA
TCTGAACCTT TTATTGCGGC GATGAACCAG TTCTTCCTGC CCGTACCTGG ATTTGATACC
TTCTATTTTG AAGGAGAAGG CAGTGCCATC AACTATATCA AGGTAGATAG TCCGGAGAGC
AATACCAAAG GATTACTTTT CAGAGGAGAT GAACCGGATG TGCCGATCTC CGTTTTTAAC
ACATCTAATA GCACAGAACT TTCTGAGAGT GTGGCCGCAC AGGTCGCAGC TTTACTGAGA
AGCGGGGAAT ATTTTATCGG TGATGAAGAT GAACGTCGTC CTGTAAAACC ATCTGATATC
GGTATCCTCG TGCGTACCGG CCGGCAGGGC AGGGAAGTAA AGGCACAGCT GGCGAGACTG
GGTATACCTG CCGTGACGGT AGATGATGCA AAGGTATTAC AATCAGAAGA GGCGACTTAC
CTGTTATACC TGATGGAGGC GATGCTGGCG CCTGACAGGT CTTCCATCAA CCGTGCCCTG
TTATCGCCTT TTACGGGTCT GAAACTGGAA TCCGTACTGA CACTGGATGA TGAAGTAACG
CTGGGCTTAT TCGGCAACTA TAAAAACAGG TGGCAGCAGG ATGGTATCTA TACCGCAATG
ATGGATTTTG TAACCGACTT CAATGTGCGT AACGTATTGC TCCATGCACA TACAGAAAGT
GGGGAACGTA TCATTTCCAA TCTCTTTCAG CTGACGGAAC TGGTACACCA GATCCAGAGC
CGTAAGAACC TGTCTATGAC AGAACTGGTA TCCTGGCTCA AACGTGGTAT AGACGGAATG
GCCACAGAAG GTGACGAGTA TGAGCAGCGT ATGGAAAGTG ATGAAGAAGC GGTGAATATC
GTGACCATTC ACAAGAGTAA AGGACTGGAA TACAAAATCG TGATGGCGCC TTATCTCGAC
TTTGTAGAAA ACAAGTATAT AGCGTTTTTT AGTTTCCGTG ACCCGCTGAC TGGTGATTAT
GTAGGTGTGG AAAAGAAGCG TATGACAGAT GAACAGCAGG CTTCTTATGC ACGTCAGGCA
GAGCAGGAGA ACAGACGTTT GTTATACGTA GCTATCACCC GTGGTGTGTA TAAATGTTTT
GTATTCCGGA ATAACTATCA TAAAAAATCT ACCCTGCTTA CTTTCCTGGA AGCATTAGTG
GCAGCAGCGC CTTCTCCTGA CATTATCCGT TTTGAAGAAG GAATGCCGGT AGCGCCTGAA
CAGCAGGCCG GCAATAAGGT CTTACCACTC GCTCCGGTTG ATCCGGATAT GCCTGTCAGG
TTTGTGCTGA AAGAACAGAA CTGGCGGAAG ATGAGTTATA CCATGCTGGC GGCAAAGGCG
GAGCATAATC TGCGGACAAG GGCTTCTCAA AAGGAAGATC CTTACGAAAC CTTTATTTTC
CACACATTGA AACGTGGCGC GAAGACGGGG AATCTGCTGC ACTTCCTGTT TGAGAATATC
AATTTCTCTG AGGATAGTCG CTGGGAAAAA TGGATCACAG AAACAGTACG CCGTTTTGTA
CCCGGGCAGC AGGACTTATA TGGCCCGATG TTGAGACAGT TACTGGAGCA TGTGTTACAG
ACAGATATTA CGGTAGATGG ACGCACATTC CCATTGGCGG CTATCATCTG GCATAAACGT
ATCCCTGAGT TTGAGTTTGA CTTCCCGGTA TCCGCGTTTT TCCCGGATAT GCTGAACGGT
CTTTCTGATG ACAGAACGAG TGTAGTCGTA CGTCGTTTCC ATGAACAGGG CAGCAGTGAA
CTGGAAGGTA TCATGAATGG GAAAATGGAC CTGTTCTTTG AGCACGAAGG CAGGTATTAT
ATCCTTGACT GGAAATCCAA CTATCTGGGA GGAACGCCGG AAGATTATAC ACCGACCGCT
GTATCCGCAG CGATGAACGA AAACAACTAT CACCTGCAAT ACCTGATTTA TACGCTGGCA
GCTAAGAAAT ACCTGGAGAG CCGCTTACAT GCATTTGACT ATGAAACGCA ATTCGGCGGG
GTGATCTACT GTTTTGTCAG GGGCATAAGA AAAGGGCAGT CTACCGGTAT ATTTACCACT
AAACCACCCT TATCTAAAAT ATTACAGCTG GAAAGTAGTT TGTCTCCCAA TGTAAACAGG
AAACAACCTC CTCAGCAAAA ACTATTCGAC ATCTACTAA
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| Protein sequence | MNEHINYQDF NAATVPLQDS NLIEASAGTG KTYSIAILVL RLVLENGLSI KEILMVTFTK
AAVAELEERI RLFVRTAYKI SQGQETRDEN IFRLVEEAVE RNGLAAVQQQ LRDAVLFLDE
TAVLTIHSFC QKTLNEFAFE TDQLFGAEMI QDTKTLIAEE VQKFWRKYVT TLHIRLLEKV
WEPDMMEGIN VALNEHMGGK RYYAYQPGKR YAIKQKEQEE WLHQLDAIDD KKAAVEKILM
DYVINERETL RGLCEGNRYA KTALLPCMDD PELFIKTVAD KRNSAKYIST LLPDMLAHMD
EVAVVDEERK GVVQQVISRL YCFAIEEIAA GVKGFKKRNN LLSYDDMITN LHKSLVDRNN
PKLEEVLREK YKAVFVDEFQ DTDRMQYEIF EKAFGESTIL FYIGDPKQSI YAWRKADIFT
YFKARASVQH VYGMNRNFRS SEPFIAAMNQ FFLPVPGFDT FYFEGEGSAI NYIKVDSPES
NTKGLLFRGD EPDVPISVFN TSNSTELSES VAAQVAALLR SGEYFIGDED ERRPVKPSDI
GILVRTGRQG REVKAQLARL GIPAVTVDDA KVLQSEEATY LLYLMEAMLA PDRSSINRAL
LSPFTGLKLE SVLTLDDEVT LGLFGNYKNR WQQDGIYTAM MDFVTDFNVR NVLLHAHTES
GERIISNLFQ LTELVHQIQS RKNLSMTELV SWLKRGIDGM ATEGDEYEQR MESDEEAVNI
VTIHKSKGLE YKIVMAPYLD FVENKYIAFF SFRDPLTGDY VGVEKKRMTD EQQASYARQA
EQENRRLLYV AITRGVYKCF VFRNNYHKKS TLLTFLEALV AAAPSPDIIR FEEGMPVAPE
QQAGNKVLPL APVDPDMPVR FVLKEQNWRK MSYTMLAAKA EHNLRTRASQ KEDPYETFIF
HTLKRGAKTG NLLHFLFENI NFSEDSRWEK WITETVRRFV PGQQDLYGPM LRQLLEHVLQ
TDITVDGRTF PLAAIIWHKR IPEFEFDFPV SAFFPDMLNG LSDDRTSVVV RRFHEQGSSE
LEGIMNGKMD LFFEHEGRYY ILDWKSNYLG GTPEDYTPTA VSAAMNENNY HLQYLIYTLA
AKKYLESRLH AFDYETQFGG VIYCFVRGIR KGQSTGIFTT KPPLSKILQL ESSLSPNVNR
KQPPQQKLFD IY
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