| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_2157 |
|---|
| Symbol | |
|---|
| ID | 8358309 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chitinophaga pinensis DSM 2588 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013132 |
|---|
| Strand | + |
|---|
| Start bp | 2639607 |
|---|
| End bp | 2640107 |
|---|
| Gene Length | 501 bp |
|---|
| Protein Length | 166 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 644964341 |
|---|
| Product | (2Fe-2S)-binding domain protein |
|---|
| Protein accession | YP_003121850 |
|---|
| Protein GI | 256421197 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG2080] Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 39 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATCAAT TTGCTGTGCC GGTATTGGTT GATCAGGCTG CACATACCAT TCACCTTACG
ATCAATAAAA TACCATATGA ACTTAAAATA CAGCCTTGGG TAACGCTGCT GGATGCGATA
CGTGAGTACG TGCAGCTTAC AGGTACTAAA AAAGGCTGTG ATCACGGTCA GTGCGGCGCC
TGTACCGTGC TGGTGAACGG AAAGCGCATC AATTCCTGTC TGACGCTTGC CGTCATGAAA
AACGGAGCCG ACATTACCAC TATTGAGGGT ATTGCGGAAG ATGGCATTTT GCATCCTTTA
CAGCAGGCGT TCATTGACCA TGATGCCTTT CAATGTGGCT ACTGTACACC CGGACAGATC
TGTTCGGCGA TCGGTATGAT GAATGAAGGA AAAGCAAAAA CGAGGGAAGA CATACAGGAA
CTGATGAGTG GTAATTTATG CCGCTGTGGC GCTTATCCGA ATATCGTGGC AGCTGTGCAA
CAGGTAAATC AAAAGCTATG A
|
|---|
| Protein sequence | MDQFAVPVLV DQAAHTIHLT INKIPYELKI QPWVTLLDAI REYVQLTGTK KGCDHGQCGA
CTVLVNGKRI NSCLTLAVMK NGADITTIEG IAEDGILHPL QQAFIDHDAF QCGYCTPGQI
CSAIGMMNEG KAKTREDIQE LMSGNLCRCG AYPNIVAAVQ QVNQKL
|
|---|
| |