| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_2114 |
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| Symbol | |
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| ID | 8358266 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 2590593 |
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| End bp | 2592149 |
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| Gene Length | 1557 bp |
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| Protein Length | 518 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 644964299 |
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| Product | glycoside hydrolase family 43 |
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| Protein accession | YP_003121808 |
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| Protein GI | 256421155 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3507] Beta-xylosidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.554254 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAATCGC TGCTTTTGCT GACAGCATTT ACACTGGCAT ATCTGTCCGG ATATGCGCAA
TCAAAGACGG CTGATAAAGC TGTAAATCCT ATTATCTACG CGGATGTGCC AGACCTGGCT
ATGATACGGG TCGGGGATAC TTATTACATG AGCAGTACGA CGACGCATAT GGCGCCTGGT
GTACCGATTA TGAAATCCAC TGATCTTGTC AACTGGCAGA TGGTGGGCTA TGCTTATGAC
GTACTGGATG ATATGGATGC CCTCAATCTG GATAATGGAA AGAGTGCTTA TGGCAGTGGT
TCCTGGGCGA GTAGCCTTCG TTATCATGAG GGTATTTTCT ATCTGACTAC ATTTTGTGGT
ACCACGCATA AGACGTATGT ATACACTACA AAAGATATAG AGAGAGGTCC CTGGAAGAAA
GCGTCTTTTA CACCGATGCT GCATGATCAT TCTTTATTTT TTGATGATGA TGGGAAGGTG
TATATGGTAT ATGGAAGCGG GAAAATCATG CTGGCGGAAC TGAATAGCGA TGCTGCGGGT
ATTAAGCCGG CTACAGCAGG TAAGGTGATT ATTGAAAATG CCAGTGCGCC TGCCGGACCG
AATATTGGTC TGCCGGCAGA GGGTTCCCAG TTATTTAAGA TCGATGGCTG GTATTACCTG
TTTAATATCT GCTGGCCTAA GGGTGGTATG CGTACGGTGA CTGTGCACCG GGCCAATAAG
ATCACCGGAC CTTATGAAGG ACGTGTAGCA TTGCAGGACA GGGGCATTGC ACAGGGAGGA
TTGATCAGTA CCCCGGATGG GAAGTGGTAT ACCTATCTTT TCCGGGATTT CGGTGCTGTC
GGGCGAGTAC CTTATTGGGC GCCTGTGCAT TGGGAAGATG GCTGGCCGGT ATTGGGCATT
AACGGCGTAG TACCTGATTC GCTGGATTTA CCGGCATCAA ATGGGATGAT GGGAGAGATC
GTAGCATCGG ATGAATTCAA CAGGAAAAAA GGAGATCGTG TGTTGCCATA TGCGTGGCAA
TGGAATCATC AGCCTGCAAA TCATCTGTGG TCATTGCAGC AACGCCCTGG TTATCTGCGG
TTGACTACTG GTCGTGTAGA TACTTCTCTT TTCCTTGCCA GGAATATGCT GACACAAAGA
ACTTATGGAC CTCAGTGCTC CGGTATCACT GCGCTGGATG TGACACATAT GAAAGACGGA
GATTGTGCGG GCTTGACCTT ATTTCAGCAG GAATATGGCT GGATAGGGGT GAAGGTGGAG
AAGAATGTCC GTTACCTGGT GATGGTCAGT TATGTGTCAG GCCGGCCTGT TGAACAGGGT
AGAATACCTT TACAGCAAAA GACGGTTTAT CTGAAAGCGG ATTGCGATTT CCGTAACCTG
ACTGATAAGG GGTACTTTTA TTATAGCCTG GATGGTCAAT CCTGGGTGCA GTTCGGAACG
GTATTACAGA TGAAATACAC CTTGCCTCAT TTTATCGGCT ACCGTTATGG GTTGTTTAAT
TACGCTACTA CAACAGCGGG TGGATACGCA GATTTTGATT TCTTCCGCTG GCAATAA
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| Protein sequence | MKSLLLLTAF TLAYLSGYAQ SKTADKAVNP IIYADVPDLA MIRVGDTYYM SSTTTHMAPG
VPIMKSTDLV NWQMVGYAYD VLDDMDALNL DNGKSAYGSG SWASSLRYHE GIFYLTTFCG
TTHKTYVYTT KDIERGPWKK ASFTPMLHDH SLFFDDDGKV YMVYGSGKIM LAELNSDAAG
IKPATAGKVI IENASAPAGP NIGLPAEGSQ LFKIDGWYYL FNICWPKGGM RTVTVHRANK
ITGPYEGRVA LQDRGIAQGG LISTPDGKWY TYLFRDFGAV GRVPYWAPVH WEDGWPVLGI
NGVVPDSLDL PASNGMMGEI VASDEFNRKK GDRVLPYAWQ WNHQPANHLW SLQQRPGYLR
LTTGRVDTSL FLARNMLTQR TYGPQCSGIT ALDVTHMKDG DCAGLTLFQQ EYGWIGVKVE
KNVRYLVMVS YVSGRPVEQG RIPLQQKTVY LKADCDFRNL TDKGYFYYSL DGQSWVQFGT
VLQMKYTLPH FIGYRYGLFN YATTTAGGYA DFDFFRWQ
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