Gene Cpin_2091 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_2091 
Symbol 
ID8358243 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp2561794 
End bp2563722 
Gene Length1929 bp 
Protein Length642 aa 
Translation table11 
GC content37% 
IMG OID644964276 
Producthypothetical protein 
Protein accessionYP_003121785 
Protein GI256421132 
COG category[L] Replication, recombination and repair 
COG ID[COG0323] DNA mismatch repair enzyme (predicted ATPase) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAATA ACAATTCATT CGTAAAAGGG TCATTATTTG AAGAAGATTA CCTGATCAGA 
ACACTTGGGC CGCTTGGTCA TTCACCTGAA GTTGCCTTAA CAGAATTAGT TTCTAATGCA
TGGGATGCAG GAGCAACCAA AGTAGATATA TTTATTCCGG AACATAGTGG AGATTATTTA
ACTGTAGCAG ATAATGGAAC AGGGCTGACA CCAGAAGACT TTGAACATCG CTGGATGAAA
CTGGGCTATA ACAGATTAAA ACACCAGGGG AAAAACGTCA TATTTCCTCC TGGGGTAGAT
GGTAATAGAC TTGCCTATGG TCGAAATGGT GTTGGTAGGC ATGGATTGCT TTGCTTTAAT
AATGAATATA CAGTTATCAC TAATGCTGGT GGTAATAAAT CGACATTCAC TGTTACGACT
GAAAGCGAAG AGCAACCATT TGTTATTAAA GATAAAAAAG TAGAACAATC CAACTTACAC
GGAACAACGT TGAAAGTTCT TGTAAATAAA AATTTGCCAA AATCGGAAAG AATTCTACAA
ATAATTTCAG CCCGATTTCT ACATGATCCA AAATTTCTGG TTTCGATCAA TAGGCAATCG
GTCCAACTGA ATCAACATAC GGGATTATTA GACACTTCTA TTCTGAAAAT AGATGAAAAG
ACTACTTTAA AAGCCCATTT TCTGGATTCA ACACAGAGCG CAAGATCTAC TATCTATCAA
GGTATTGCCT TTTGGCAAAG CAATAAATTA GTGGGAGAAC CTTCGTGGTC CCTGGGAGGA
GAAATTGTTA TAGATGGAAG GACCAAATTC GCTAAAAGAT ATACGGTAGT TGTAGAGACA
AACGATCTCG CTGATTATAT AACTGAGGAT TGGACCGGAT TTAAGAATAA CTCATATATG
GATAAGATAT ATGCAGTAGT AATGGAGTAT GTTAACAAAA TGCTTACAAC TGTTGCCGAT
GAATATGTTG AGGAAGCAAA ACAACAGGTA AAAGCCAATT TTTCTGAAGA TATCGCACAA
TTAACGCCTT TAGGCAAATA TGAGGTTATC GAAGCAATAG AGACTATCAC TTCAGCTCAT
CCAACCGCTC GTCCGGAAAC AATATCAATC GCCGTTCAGG CAATTATTAA TTTAGAGAAA
ACCCGCTCGG GCAAAGAACT ATTGATAAGA CTTGCCAGTC TTTCAGAGGA CGATTTCATA
GGATTAAATG AACTTTTACA AAAGTGGTCA ATTAAAGATG CGCTTATCGT ATTGAATGAA
ATAGATAATC GTATTTCATT AATTGAAGCA ATTCGGAAGT TATCATCAGA TCCCGATGTT
GATGAATTAC ATGTTTTACA TCCGCTGGTT TCTGGCGCTC GTTGGCTTTT CGGTCCTGAG
TTTGAATCTC CTGAGTATTC TTCTAATAGA CAATTACAAA CAGCTGTTGA ACAGGTATTT
AAGAAGAAAA TCGATCCGAC AGTATTCCTG AATAATAAAA AAAGACCGGA TATTGTTTTA
TTGAAGGACT CAACTGCATC TGTAACAGGT ATAGAGGCTT TTGATAGCGA TTCAGGTTTA
GCTACTGTAA ACAAGATTTT AATCATTGAA CTAAAGAGAG GTGGTTTCAA TTTAACCCGT
GATGAAAGAA ACCAGGCTCA GGGATATGTT GAAGACTTTA TGAATTGTGG AAGATTAATA
GGTGCTCCTT ATATAGAAGC TTTTGTAATT GGACAATCGT TCGCTAAAAA TCTCCAGCCG
ATTACCACTG TAAAAAATGC AAATGATGTG GAAATGGGAA AAATTCGTCT TTCTACATTT
TCCCAGTTAA TAGATACCGC TGAAAAACGG TTGTTTGGCT TACGAGATAA GCTCAATGAA
CGTTATGACG ATATTCCTGG AATCGATCTC TTTAAGGCTC AGGCTACACA AATAGCCCTG
AAGTTATGA
 
Protein sequence
MSNNNSFVKG SLFEEDYLIR TLGPLGHSPE VALTELVSNA WDAGATKVDI FIPEHSGDYL 
TVADNGTGLT PEDFEHRWMK LGYNRLKHQG KNVIFPPGVD GNRLAYGRNG VGRHGLLCFN
NEYTVITNAG GNKSTFTVTT ESEEQPFVIK DKKVEQSNLH GTTLKVLVNK NLPKSERILQ
IISARFLHDP KFLVSINRQS VQLNQHTGLL DTSILKIDEK TTLKAHFLDS TQSARSTIYQ
GIAFWQSNKL VGEPSWSLGG EIVIDGRTKF AKRYTVVVET NDLADYITED WTGFKNNSYM
DKIYAVVMEY VNKMLTTVAD EYVEEAKQQV KANFSEDIAQ LTPLGKYEVI EAIETITSAH
PTARPETISI AVQAIINLEK TRSGKELLIR LASLSEDDFI GLNELLQKWS IKDALIVLNE
IDNRISLIEA IRKLSSDPDV DELHVLHPLV SGARWLFGPE FESPEYSSNR QLQTAVEQVF
KKKIDPTVFL NNKKRPDIVL LKDSTASVTG IEAFDSDSGL ATVNKILIIE LKRGGFNLTR
DERNQAQGYV EDFMNCGRLI GAPYIEAFVI GQSFAKNLQP ITTVKNANDV EMGKIRLSTF
SQLIDTAEKR LFGLRDKLNE RYDDIPGIDL FKAQATQIAL KL