| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_2020 |
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| Symbol | |
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| ID | 8358171 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 2462232 |
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| End bp | 2463056 |
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| Gene Length | 825 bp |
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| Protein Length | 274 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 644964207 |
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| Product | 2-dehydro-3-deoxyphosphooctonate aldolase |
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| Protein accession | YP_003121716 |
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| Protein GI | 256421063 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2877] 3-deoxy-D-manno-octulosonic acid (KDO) 8-phosphate synthase |
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| TIGRFAM ID | [TIGR01362] 3-deoxy-8-phosphooctulonate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.00991781 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGTCAGCAA CAACACATCT GAAATCCCTT TTTAAGGATC AATACAATCC TGACAACTTT
TTTCTGATAG CCGGTCCTTG TGTAGTAGAG GATGAAGCGC TGCTGATGCA TGTAGCTGAA
AAAGTTTCAG GAATCTGCAA AAGACTGAAT ATCCCATATA TCTTCAAAGC GTCTTATCGT
AAAGCGAACC GTACCAGTAT CAACTCCTTT GCCGGTGTTG GTGATGTGGA AGGACTGGAC
CTCTTACAAA AGACTAAAGA AACATTCGAT CTGCCTGTTA CAACAGATAT TCACTCCGCT
GCGGAAGCTG CTATGGCTGC TGCGTATGTG GATATCCTGC AGATCCCGGC GTTCCTTTGC
CGTCAGACTG ATATCCTGAT CGCAGCTGCG GAAACCGGTA AAGTGGTGAA TGTAAAGAAA
GGCCAGTTTG TAAGCGGCGA AGCCATGAAA TTTGCGGTTG AAAAAGTAAA ACAGGCAGGT
AATGATAAAG TTTGGCTGAC CGAGCGCGGT ACCACCTTCG GTTACCAGGA CCTCGTGGTA
GACTACCGCA ATATTCCGAT TATGCGTGAA CATGGCGTAC CTGTTATCAT GGATTGTACA
CACTCCCTGC AACAGCCTAA CCAGACCAGC GGCGTTACCG GCGGTAACCC GAAACTGATC
GGCACTATCG CCAAAGCAGC TATTGCTACC GGCGCAGATG GTCTGTTCAT CGAAACACAT
CCTGATCCAT CCAAAGCGAA GTCCGACGGC GCTAACATGC TGCACCTGGA TCTGCTGGAA
GGATTACTGG AAGACCTGGT AAGAATCCGT GAAGTAATAA GATAA
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| Protein sequence | MSATTHLKSL FKDQYNPDNF FLIAGPCVVE DEALLMHVAE KVSGICKRLN IPYIFKASYR
KANRTSINSF AGVGDVEGLD LLQKTKETFD LPVTTDIHSA AEAAMAAAYV DILQIPAFLC
RQTDILIAAA ETGKVVNVKK GQFVSGEAMK FAVEKVKQAG NDKVWLTERG TTFGYQDLVV
DYRNIPIMRE HGVPVIMDCT HSLQQPNQTS GVTGGNPKLI GTIAKAAIAT GADGLFIETH
PDPSKAKSDG ANMLHLDLLE GLLEDLVRIR EVIR
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