Gene Cpin_2002 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_2002 
Symbol 
ID8358153 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp2441479 
End bp2442855 
Gene Length1377 bp 
Protein Length458 aa 
Translation table11 
GC content51% 
IMG OID644964189 
Productmagnesium transporter 
Protein accessionYP_003121698 
Protein GI256421045 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2239] Mg/Co/Ni transporter MgtE (contains CBS domain) 
TIGRFAM ID[TIGR00400] Mg2+ transporter (mgtE) 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.493999 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.0929187 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAAATG AAGTATTACT GGAAAAATTT GAGACGCTGG TCGCTGAGCA GAACTTCCCG 
GAACTGAAAG TGTACCTGGA TGACCAGCTT ATCACAGACA TCGCCGAGCT CATTCACGAG
CTGCCGGAGC ATGCTGACGT GATCATGAAT CAGTTGTCCA TAGGCCGTGC TGCTGCAGCT
TTCAGGATCC TGGAATTTCA TATACAGGAA GAGGTGATCC GGGAGCTGCC CGCTGCAAAA
GTCGCAGAGC TGCTGAATGA ACTACCGGCG GATGACCGTA CCGCCTTCCT GGGTGAATTA
CATAGCGACG TGGTGAAAGA GCTGATCAAG CTACTGGACC CCGAAGAACG TAAGATCACC
CTTAGTCTGC TGGGGTATCC TGAAACCAGT GTAGGACGTA TCATGACGCC CGAGTACATC
GCGGTACGTG AGGAATGGAC GGTGAAACAG GTACTGCGCT ATATCAGGGA GTACGGTAAA
GACAGTGAGA CCATCGATGT GATATATGTG GTAGACGAAA AGGGGAAACT GATAGATGAC
TTCCGTATCA GAGAGTTTCT GCTGGTAGCG CCCGACACCG TTGTACATAC CCTGATGGAT
GACCGCTTTG TCGCCTTACA TGTCAGCGAT GACCAGGAAG AAGCCATCCA GGTATTCCGT
ATGGAAAACA GGGTCGCGCT GCCGGTAGTA GATGACGCAG GTATCCTGCT GGGTATCATC
ACCATTGATG ACATCCTCTG GATCGCCAAT GAAGAACATA CAGAAGATAT CCAGCGTATC
GGTGGTACCG AGGCACTGGA TGAACCCTAC CTGGATATTC CCCTGCTGAA ACTGATGAAA
AAGAGGATCG GCTGGCTGGT TGTACTCTTT ATCGGAGAAA TGCTGACGGC TACCGCCATG
AGCTTCTTTG AAGACGAAAT AGCCAAGGCA GTAGTACTGG CCCTCTTTGT GCCTCTTATT
ATCTCCAGTG GGGGTAATAG CGGTTCTCAG GCATCTACCC TGATCATTCA GGCAATGGCG
CTGGGTGAGA TCAGTATTGC CGACTGGTGG AAAGTGATGC GCAGGGAGAT CATCTCCGGC
CTGTTACTGG GTAGTGTGTT AGGGTTGATC GGATTTATCC GTATCCTGCT GTGGAATGCC
TTCTTTCATA CCTATGGCGA TCATACCCTA TTGATCGGGT TAACGGTAGG CATATCGTTG
ATAGGGGTCG TCCTCTGGGG AACGCTTTCT GGCTCTATGC TGCCATTGCT CCTGAAAAGG
CTGGGGGCAG ATCCTGCTAC GTCGTCAGCC CCCTTTGTGG CTACACTGGT AGACGTAACC
GGTTTGCTGA TCTATTTCTC AGTAGCTTAT ACCCTGCTGA AGGGAGTAAT GCTGTGA
 
Protein sequence
MENEVLLEKF ETLVAEQNFP ELKVYLDDQL ITDIAELIHE LPEHADVIMN QLSIGRAAAA 
FRILEFHIQE EVIRELPAAK VAELLNELPA DDRTAFLGEL HSDVVKELIK LLDPEERKIT
LSLLGYPETS VGRIMTPEYI AVREEWTVKQ VLRYIREYGK DSETIDVIYV VDEKGKLIDD
FRIREFLLVA PDTVVHTLMD DRFVALHVSD DQEEAIQVFR MENRVALPVV DDAGILLGII
TIDDILWIAN EEHTEDIQRI GGTEALDEPY LDIPLLKLMK KRIGWLVVLF IGEMLTATAM
SFFEDEIAKA VVLALFVPLI ISSGGNSGSQ ASTLIIQAMA LGEISIADWW KVMRREIISG
LLLGSVLGLI GFIRILLWNA FFHTYGDHTL LIGLTVGISL IGVVLWGTLS GSMLPLLLKR
LGADPATSSA PFVATLVDVT GLLIYFSVAY TLLKGVML