Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_1968 |
Symbol | |
ID | 8358119 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 2401279 |
End bp | 2402418 |
Gene Length | 1140 bp |
Protein Length | 379 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 644964156 |
Product | efflux transporter, RND family, MFP subunit |
Protein accession | YP_003121665 |
Protein GI | 256421012 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0845] Membrane-fusion protein |
TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.0000000223491 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.235934 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAACAA AGCAACACAT TCTCCTCATT GGCGCTACAG GCTTATTTTA CCTGGCTTCC TGTAAAGGCC CGGCTCAGAA AGCAGCCATG GTATTGCCTC CTACACCGGT AAGCGTAGTG CCGGCAGTTA CTGGTACTGC TATTTACTAC GATAAATATC CCGCTACAGT GGTAGCACTG AACCAGGTTG AACTGCGTGC ACAGGTGTCA GGATATATTA CCGGCATTTT CTTTAAAGAA GGTGAAGTGG TACAGAAAGG AAAACCGCTC TATGAAATAG ACCGTCGTAA GTATGAAGCT ACTTATCGCC AGGCAGAAGC TAGTATTGCC CAGGCAAAAG CGAACCTTAC GAAAGCACAA AAAGACGCAG ACCGTTATCA TAAACTGGCA GAGCAGGACG CGATTGCCCG TCAGACGCTG GACAATGCAG ACGCTGCACT GGACGTGAGC CGTAGCCAGC TCGCCGCTGC GGAAGCTTCT TTACTGTCTG CCCGCACAGA TCTGGACTAT GCTGTAATTA AAGCTCCTTT TACCGGCCGT ATCGGTATCT CCCAGGTGAA ACTGGGTGCA CAGATCGGTG CCGGAACGAC TTTACTGAAT ACTATTTCCT CAGAGAATCC GATCGCTGTT GATTTCGTGG TGAATGAAAA TGATATCCCA CGTTTCTCCG GTATGCAGGG TAAAGCGGTA ACTCCGGGTG ATTCTACTTT CCGTCTGCAA TTGCCTAACG GACAGGCTTA TACTGAACCG GGTCGTCTGA CAGTAGTCGA TCGTGGTGTA GATAACCAGA CAGCTACTAT CAAGGTGCGT ATTGAATTCA ACAACCCGAA GAATGAGCTG AAAGAAGGTA TGAGTGGTGT GATGAATGTA CTGAACGATC AGTCAGGCGA TCGCGTAATC ATTCCTTACA AAGCAGTGGT TGAACAGATG GGTGAATTTT TCGTATTTGT TGCGAAAGAT ACTGTTGCAG AACAGCGTAA AATACATCTG GGCCCTCGTC TGAGAGAAAG CATCGTCGTA ATGGACGGTG TTAAACAAGG CGAGCTGGTG ATTGCAGAAG GTATACAGCG TTTACGCGAT GGTGGTAAGA TTGATACCAC TACCGTAAAG AAAGCGCCGG ATGCCGCAGC TAAGAAATAG
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Protein sequence | MKTKQHILLI GATGLFYLAS CKGPAQKAAM VLPPTPVSVV PAVTGTAIYY DKYPATVVAL NQVELRAQVS GYITGIFFKE GEVVQKGKPL YEIDRRKYEA TYRQAEASIA QAKANLTKAQ KDADRYHKLA EQDAIARQTL DNADAALDVS RSQLAAAEAS LLSARTDLDY AVIKAPFTGR IGISQVKLGA QIGAGTTLLN TISSENPIAV DFVVNENDIP RFSGMQGKAV TPGDSTFRLQ LPNGQAYTEP GRLTVVDRGV DNQTATIKVR IEFNNPKNEL KEGMSGVMNV LNDQSGDRVI IPYKAVVEQM GEFFVFVAKD TVAEQRKIHL GPRLRESIVV MDGVKQGELV IAEGIQRLRD GGKIDTTTVK KAPDAAAKK
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