| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_1929 |
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| Symbol | |
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| ID | 8358080 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 2356607 |
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| End bp | 2357935 |
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| Gene Length | 1329 bp |
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| Protein Length | 442 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 644964117 |
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| Product | xylose isomerase |
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| Protein accession | YP_003121626 |
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| Protein GI | 256420973 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2115] Xylose isomerase |
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| TIGRFAM ID | [TIGR02630] xylose isomerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.116682 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.849458 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGTATTA CTTTAGGGAA TCAGGAGTAC TTCAAAGGCA TTGGTAAAAT CGCCTATGAA
GGACCTCAGT CAACAAATCC GTTTGCCTAC AAATGGTATG ACGAGAACAG AAAGATCGGT
GGTAAAACCA TGAAGGAACT GTTTCGTTTT GCAGTCTCCT ACTGGCACAC CTTCTGTGGT
ACCGGCGGAG ATCCGTTCGG TCCGGGCACC AAGGCTTTCC CCTGGTTAAC TGCCACTGAT
GCAGTGCAGA GTGCGAAAGA TAAAATGGAT GCTGCATTCG AATTCTTCAC CAAACTGGGT
GTTCCTTACT ACTGCTTCCA CGATGTGGAT CTGGTAGATG AAGGCGCATC GATCAGCGAG
TACGAAAGCC GTATGCAGCA GATCGTGGAG TATGCAAAAG AAAAACAAAA AGCCAGCGGT
GTAAAACTGC TGTGGGGTAC TGCGAATGTG TTCAGCAATC CGCGTTACAT GAATGGTGCT
GCTACCAATC CGGACTTCGC TGCTGTTGCC TATGCAGGTA CCCAGGTGAA AAACTCCCTG
GATGCAACGA TCGCACTGGG TGGTGAAAAC TACGTATTCT GGGGCGGCCG TGAAGGTTAC
ATGACCCTCC TGAACACCGA CATGAAGCGT GAACAGGAAC ACCTGGCCCG CTTCCTGACA
ATGGCAAAAG ATTACGCGCG TAAACAGGGC TTTACAGGTA CCTTCTTCAT CGAACCTAAG
CCTTGCGAAC CTACCAAACA TCAGTACGAT TATGATGCTG CGACCGTAAT CGGCTTCCTG
CGTCATTTCG GACTGGATAA AGACTTCAAA TTGAACCTGG AGGTAAACCA CGCAACCCTG
GCAGGTCATA CCTTCCAGCA CGAACTGCAG GTTGCTGCCG ATGCAGGTAT GCTGGGCAGT
ATCGACGCAA ACCGTGGTGA TGCACAGAAC GGCTGGGATA CTGACCAGTT CCCGATGAAC
CTGAACGACA TGGTTGAGTT CATGCTGGTG ATCCTGGAAG CTGGCGGCTT CTCCGGCGGT
GGTGTGAACT TCGATGCGAA AACACGCCGT AACTCAACTG ACCTGGAAGA CATCTTCCAT
GCACATATCG GTGGTATTGA TTCCTTTGCA CGTGCCGCCG TTATCGCAGA AAAAGTGCTG
GAACAGTCTC CATACAAACA GTTCCGCAAA GACCGTTACG CTTCATTCGA CAGCGGTAAG
GGTAAAGATT TCGAAGCTGG TACCCTGACA CTGGAAGATC TGCGCAGCTT TGCCGTAAGC
AATGGCGAGC CTAAGCATAT CAGCGGTAAA CAGGAATGGC TGGAGAATAT CATCAATCAG
TATATCTGA
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| Protein sequence | MSITLGNQEY FKGIGKIAYE GPQSTNPFAY KWYDENRKIG GKTMKELFRF AVSYWHTFCG
TGGDPFGPGT KAFPWLTATD AVQSAKDKMD AAFEFFTKLG VPYYCFHDVD LVDEGASISE
YESRMQQIVE YAKEKQKASG VKLLWGTANV FSNPRYMNGA ATNPDFAAVA YAGTQVKNSL
DATIALGGEN YVFWGGREGY MTLLNTDMKR EQEHLARFLT MAKDYARKQG FTGTFFIEPK
PCEPTKHQYD YDAATVIGFL RHFGLDKDFK LNLEVNHATL AGHTFQHELQ VAADAGMLGS
IDANRGDAQN GWDTDQFPMN LNDMVEFMLV ILEAGGFSGG GVNFDAKTRR NSTDLEDIFH
AHIGGIDSFA RAAVIAEKVL EQSPYKQFRK DRYASFDSGK GKDFEAGTLT LEDLRSFAVS
NGEPKHISGK QEWLENIINQ YI
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