Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_1919 |
Symbol | |
ID | 8358070 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 2343000 |
End bp | 2343905 |
Gene Length | 906 bp |
Protein Length | 301 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 644964107 |
Product | branched-chain amino acid aminotransferase |
Protein accession | YP_003121616 |
Protein GI | 256420963 |
COG category | [E] Amino acid transport and metabolism [H] Coenzyme transport and metabolism |
COG ID | [COG0115] Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase |
TIGRFAM ID | [TIGR01122] branched-chain amino acid aminotransferase, group I |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.451935 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTATAGCT ATTACAACGA GAACACCATT CTTTACATTA ACGGGGAGTA TAAGAAAGCT ACCGCGGCCA CTACAGATTT GTATGGTCAG TCATTACATT ATGGGTATGC TGTATTTGAA GGCATTCGTG CTTATAAAAC AGCTGATGGA ACTGTGAAGA TTTTCAAAGC AAAAGAACAC TTCGACAGAT TTAAGCGTTC CTGCGAATTA ATACACATGC CGTATCCATT TGATAATGAC GAGCTGGTGA AAGCATGTTA CAAAGTGCTG GAACTGAATA ATATGGAAGA AGCGTACATC CGTCCGCTCG CTTTCTGCCC TCCGAACATG ACACTGAAGG CTGCTGCCGA AACACATGTA CTGATCTGTG CATGGGAATG GGGAGCATAC CTGGGCGAAA AACTGCTGCG TGTGATGACC TCATCTTACC AGCGCCCAAA TCCAAAAGCA TTCAAGATCG AGTCTAAAAC AGCTGGTCTG TATGTAAACT CTATCCTGGC TTCTCAGGAA GCAAAGGAAC AGGGTTACGA CGAAGCGCTG CTCCTGGATA TCAACGGCTT TGTAGCTGAA GGTCCCGGCG CTAACCTGTT CTTCGAAAAA GACGGTAAGA TCTTCACACC TCCTCCAGGC AACATCCTGC CAGGTATTAC CCGTGCTACC GTGATCGAAC TGTGTCATGA ACTGGGTATT CCGCTGGAAG AGAAACTCTT TACTACTGAC GAACTGAAAA CAGCTGACTG CGTATTCTAT TGCGGTACTG CTGCTGAAGT AGTAGGATGG GATTCACTCG ATGGCCAGAC TTTTAACAAG CCATGGGCTA CTTCTCTGGG TAAACTGCTG CAGCAGGCTT ACAAAGCGAA AGTACTTGAG AAAGAATTCG ATCGCGCTGC GGTTCCGGTC GCGTAA
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Protein sequence | MYSYYNENTI LYINGEYKKA TAATTDLYGQ SLHYGYAVFE GIRAYKTADG TVKIFKAKEH FDRFKRSCEL IHMPYPFDND ELVKACYKVL ELNNMEEAYI RPLAFCPPNM TLKAAAETHV LICAWEWGAY LGEKLLRVMT SSYQRPNPKA FKIESKTAGL YVNSILASQE AKEQGYDEAL LLDINGFVAE GPGANLFFEK DGKIFTPPPG NILPGITRAT VIELCHELGI PLEEKLFTTD ELKTADCVFY CGTAAEVVGW DSLDGQTFNK PWATSLGKLL QQAYKAKVLE KEFDRAAVPV A
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