Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_1915 |
Symbol | |
ID | 8358066 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | - |
Start bp | 2337717 |
End bp | 2340089 |
Gene Length | 2373 bp |
Protein Length | 790 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 644964103 |
Product | Beta-N-acetylhexosaminidase |
Protein accession | YP_003121612 |
Protein GI | 256420959 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3525] N-acetyl-beta-hexosaminidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACAATG ACTTGGAACG GCCAGTAAAT AACCATACCA ACATGATGCA TATGAAAACA TTATTCCTGT CGATGCTCGC CATCTGCTGT TACCTATCTG GTACAGCACA GCTGAAAACC GGCGACATCA CCATTATCCC TGAGCCACTA CTGCTCAATC CTATGCCCGG CAGCTTTGTT GTAAACGATC AGGCAGCCAT TCAATACAGT GGCAAAGGCG CTGAAAAAAC AGCGGCATTC CTGAATGATT ACCTGCAACG TAATTATAAC TTCAAGCTCC CTGCCAGTCC TGCAACCGCA TCCGGACAAG CATCCAATTC CATTATCAAA ATTGTGGAGA CACGCAGTGG TAAAGCGGAA GGATATATCC TCGAAGTAAA TACCGGCCGG GTCTATCTGC AGGGAGATGC AGCCGGACTG TTTTACGGTC TGCAAACGTT AATACAACTG TTTCCTGTTA ATAAAAATAT CAAACCTGCG ACTGACACTG TCAGACAAAC ACCTTATAAC GGCAGTCTTC ATCTGCCCGG CGTAAAGATC CAGGACTACC CACGTTTTGC TTATCGTGGT ATGATGCTGG ACGTGAGCCG TCACTTCTTC CCTCCTGCTG CCATCAAAGA GTTTATCGAT ATGATGGTAC TTTATAAATT CAACCGCTTC CACTGGCACC TTACCGACGA CCAGGGATGG CGTATCGAGA TCAAGAAATA TCCACGTCTG CAAGAGATTG CTTCCACCAG GAAAGAGACC ATCGTCGGAC ATCATCGCCG TAGTACTACT TATGATGGTA AACCTTATGG TGGTTATTAT ACACAGGATG AAGTACGCGA TATTGTAAAA TATGCAGCAG AAAGAAATAT CACGATCATT CCTGAAATAG AGATGCCTGG GCACTCGCAG GCTGTACTCA CCGCTTACCC CTCTTTCGGT AATACCAAAG GACCTTATGA AGTACGCACC ACCTGGGGCA TTTCCAAAGA TGTACTGAAT CCTGTGAATG ACTCCGTGTT TACCTTCCTG CAGGATGTAT TGACTGAAGT GATAGACCTC TTCCCCAGCC AGTTTATCCA CATTGGCGGA GATGAATGTC TGAAAGACAG ATGGAAAGAA TCTGCAGAAG TACAGCGCAT GATCCGCAGA CTGGGACTGA AAGACGAACA CGCATTACAG AGTTATTTCA TTCAGCGTAT GGAGAAGTTT GTCAATAGTA AAGGACGTTC TATTATCGGA TGGGATGAAA TACTGGAAGG CGGACTGGCA GCCAATGCCA CCGTTATGAG CTGGCGCGGA GAAGAAGGTG GCATCGCAGC TGCAAAGCAG CAACACAATG TCATCATGAC ACCTAATACT TATCTCTATT TTGACTATAC ACAAGGACAA CCTTCTACAG AACCACTGAA TGCGGCTGCT TATCTGCCAT TGAAAACGGT ATATAATTAT GAGCCTTTAC CTCCATCACT AACGCGAACG GAACAACGTT ATATAAAAGG TGTGCAAGGC AATATATGGA CAGAGTTTAT TCCCGATCAG CAGATGCTGG ATTATATGCT GTGGCCACGT GCACTGGCTT TATCTGAAAT AGCCTGGGCA CAACCTGGTA AAAAGAATTA TGACCGTTTC CTGCGTAAGC TGCCACTGGA GCTTTCCCGC ATGAGTTATG CCGGTATTAA TTTCCGTATA CCGGAACCTA TCGGACTGGA AAGTAAAGTG GTGACAACAC CAACAGTGAG CGTCACACTG AAGACACCGG TAAAAGGGGG TATGATCTAT TATACGACTG ACGGTACACA ACCCGGATTG CGCAGCAAAC CTTATACACA GCCTATCACT ATCAACGTTC CTGAAAATAG TACGGCACAG TTAAATTGTA TCGTGGTACT ACCTACGGGA CGTGTGAGTC CGCTGTACAG CGCTTCCTAT GTAAGAAAAG CATTTCTACC TGCTGTTGCC ACAAAACAGG GCGCAAAAGG CGTGCGTTTC TCCCTGGTAA AAACAGTACC TGCCAATGCA AAGCAATTGC CTGAAAAAGG CGACAGCAGC GGTATACTGC CAGCAGTAGA TGTCCGTCCC TTATCAGTAA AAGAGTATGG TGTTACTTTT ACGGGACTGG TAAAGATTCC TGCGGATGAT CTCTATGATT TCCATCTGAA CAGCGACGAT GGCGCTGTAT TTTATATCGA CGATCAGGTA GTGGTGGATA ATGATGGTCA GCATGACCTG CAGGACCGTA ACGGCTTTGT GCCTTTACGC AAAGGACTCC ATCGCATCAG GGTACAATAC TTTAATACCG GTACCGGTGC CTGGCTGAAT GCAGGTATAT ACAGAGACAG GGAGAAACTG AATCCGGCAG ATATATTTTT CACCGGTCAG TAA
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Protein sequence | MDNDLERPVN NHTNMMHMKT LFLSMLAICC YLSGTAQLKT GDITIIPEPL LLNPMPGSFV VNDQAAIQYS GKGAEKTAAF LNDYLQRNYN FKLPASPATA SGQASNSIIK IVETRSGKAE GYILEVNTGR VYLQGDAAGL FYGLQTLIQL FPVNKNIKPA TDTVRQTPYN GSLHLPGVKI QDYPRFAYRG MMLDVSRHFF PPAAIKEFID MMVLYKFNRF HWHLTDDQGW RIEIKKYPRL QEIASTRKET IVGHHRRSTT YDGKPYGGYY TQDEVRDIVK YAAERNITII PEIEMPGHSQ AVLTAYPSFG NTKGPYEVRT TWGISKDVLN PVNDSVFTFL QDVLTEVIDL FPSQFIHIGG DECLKDRWKE SAEVQRMIRR LGLKDEHALQ SYFIQRMEKF VNSKGRSIIG WDEILEGGLA ANATVMSWRG EEGGIAAAKQ QHNVIMTPNT YLYFDYTQGQ PSTEPLNAAA YLPLKTVYNY EPLPPSLTRT EQRYIKGVQG NIWTEFIPDQ QMLDYMLWPR ALALSEIAWA QPGKKNYDRF LRKLPLELSR MSYAGINFRI PEPIGLESKV VTTPTVSVTL KTPVKGGMIY YTTDGTQPGL RSKPYTQPIT INVPENSTAQ LNCIVVLPTG RVSPLYSASY VRKAFLPAVA TKQGAKGVRF SLVKTVPANA KQLPEKGDSS GILPAVDVRP LSVKEYGVTF TGLVKIPADD LYDFHLNSDD GAVFYIDDQV VVDNDGQHDL QDRNGFVPLR KGLHRIRVQY FNTGTGAWLN AGIYRDREKL NPADIFFTGQ
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