| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_1900 |
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| Symbol | |
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| ID | 8358051 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 2322259 |
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| End bp | 2324865 |
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| Gene Length | 2607 bp |
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| Protein Length | 868 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 644964088 |
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| Product | DNA mismatch repair protein MutS |
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| Protein accession | YP_003121597 |
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| Protein GI | 256420944 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0249] Mismatch repair ATPase (MutS family) |
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| TIGRFAM ID | [TIGR01070] DNA mismatch repair protein MutS |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.419193 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAAAAA GCAAATCGGT AGAAACCCCG CTCATGCAAC AGCACAACGC CATCAAGGCC
CGTTACCCGG ATGCTGTGTT GTTGTTCCGC GTGGGAGATT TTTATGAAAC TTTTAATGAC
GATGCAATCA TCGCGTCCAA GGTATTAGGT ATTGTACTCA CCAAAAGAGC CAATGGTTCT
GCTTCACAAC AGGATCTGGC TGGTTTTCCC CATCACTCTC TCGATACTTA CCTGCATAAA
CTGGTTAAAG CCGGCTATCG CGTAGCGGTA TGCGATCAGC TGGAAGATCC CAAAATGGCC
AAAGGTATTG TGAAACGTGG CGTGACCGAG ATGGTCACTC CGGGTGTGGC TGTGAATGAC
AAGATCCTGG AAAATGCCAG CAACAACTTC CTGGCGGCCG TTCATTTTGG AAAAGAACTG
ACCGGTGTCG CATTCCTCGA TATTTCTACC GGTGAATTCT TTGTGGCTCA AGGCAACCTG
GAATATGTGG ATAAACTCCT GCAGAGTTTC AAACCGGCAG AAGTCATCTT CGCCCGTCCG
CAACAAAAAC ATTTCAAGGA ACAATTCGGT TCCAAATTCT ATACATATAC ACTGGAAGAG
TGGATCTTCA CGACCAATTA CGCGGAAGAA ACCCTGCTCA AACAGTTTGA GACGCACAGT
CTGAAAGGAT TTGGCGTAGA CGGTTTGCAA GACGCTATCA TTGCGGCAGG TGCTTGTCTG
CATTACCTGC GCGACACTGA GCATCCACAT CTGCAACATA TTACCAACAT CCAGCGCATC
GAACAGGATG ATTTTCTCTG GATGGACCGC TTCACCATCA GGAACCTGGA ACTGCTGGGC
AGCAGTGTCG AAAACGGTCA TACCTTGTTG AAAACACTGG ACACGACGGT TACACCTATG
GGCGCCAGAT TGCTGAAACG CTGGATGGTA CTGCCATTAA GGGATATCAA ACAGATCAAC
GAAAGACTGG ATGTAACCGA GCATTTCATC AAAGAAACCG ATCTTTCCAG GGATGTACTG
CAACACCTGA AACAGACAGG CGACCTGGAA AGACTTGTCT CCAAGATACC TCTGCGGAAG
ATCAATCCGC GTGAAGTGAT GATGCTGGCG AAAGCCTTAC AGCAGGTGGA GGGGATCAAA
CAACTGCTGG CAAAGACAGG GCATCCTTAT CTGACCGCTA TTGGTGAAAA ACTGAATCCA
TGTCCGGGCA TCCTTTGCCG CATCCTGGAA CAGATCGTTG AAACACCGCC GATACTGGTC
AGCAAAGGCG GCGTTATACA AAACGGTATA CATACCGAAC TGGATAACCT GCGTACGATT
GCTCATTCAG GTAAAGAATA CCTGCTGCGT ATTCAGCAGA CAGAGTCTGA CGCGACCGGC
ATTCCAAGTC TGAAAGTAGC GTTCAATAAT GTGTTCGGCT ATTACCTTGA AGTAACGAAC
GCACATAAAA GCAAAGTACC TGAAAACTGG ATCCGCAAAC AGACGCTGGC CAATGCAGAG
CGTTATATCA CACCTGAGCT GAAGGAATAT GAAGAAAAGA TCGTAGGTGC GGAAGAAAAG
ATCCTGGCAC TGGAAATACA GTTGTTTGAC GAATTGCTGC TGGCATTACA ACCACACATT
CAGGCTATCC AGCAGAATGC ACAGCTGATG GCACGACTGG ACTGTCTTTT AAGTTTTGCC
AATAACGCCA TTCAATACAA ATACCGTCGT CCGAATGTCA CAGAGGGATA TCACCTGGAC
ATCCGTGAAG GCAGACATCC GGTTATTGAA AGAGGTTTGC CACCCGGAGA AAGTTATGTA
GCGAATGATA TTGTACTGGA TAAAGAAGAA CAACAGATCA TCATTCTGAC GGGTCCGAAC
ATGAGTGGTA AATCCGCCTT GCTACGACAG ACCGCGCTCA TTACACTGAT GGCGCACATG
GGTAGCTTCG TACCGGCAAG CGCGGCGGAG ATCGGTTTAA CAGACAAGAT CTTTACACGT
GTAGGCGCTT CGGATAACCT GAGTGGTGGA GAATCTACCT TCATGGTTGA AATGAATGAA
ACAGCCAGCA TTATCAACAA TATCACGCCA AGAAGTCTGG TAATACTGGA TGAAATCGGC
CGTGGTACCA GTACTTACGA TGGTATTTCT ATTGCCTGGA GCATTGTGGA ATACCTGCAT
GACATGACTC CGCATAAGCC TAAAACACTT TTTGCGACAC ACTATCATGA GCTGAATGAA
CTGGAGAATA AACATGGTCG TATCAAGAAC TACCATATCA CCAATAAAGA ATCCGGTAAT
AAAGTGATCT TCCTGCGTAA ACTGGCGCCA GGTGGTAGTC GCCACAGCTT TGGTATACAT
GTGGCGCGTA TGGCGGGTAT GCCTCCTCAG TTGCTGCAAC GCGCCAATGA AGTGCTGTCA
CACCTGGAGC AGAAACACAT TGATGCGCCG TTGGAAAAAC ATGTGAAAGA GATGGCGGGA
CCTACGCAGA AAGTACAGCT CAGCATCTTT GATGCGCATA GCGATACTTT CAAAGAAATC
AGGGATATGT TGAATGATGT AGACATCAAT AGATTAACGC CGGTAGAGGC GTTGTTAAAG
CTGAATGAGA TTAAAAATCT TCTGTAA
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| Protein sequence | MAKSKSVETP LMQQHNAIKA RYPDAVLLFR VGDFYETFND DAIIASKVLG IVLTKRANGS
ASQQDLAGFP HHSLDTYLHK LVKAGYRVAV CDQLEDPKMA KGIVKRGVTE MVTPGVAVND
KILENASNNF LAAVHFGKEL TGVAFLDIST GEFFVAQGNL EYVDKLLQSF KPAEVIFARP
QQKHFKEQFG SKFYTYTLEE WIFTTNYAEE TLLKQFETHS LKGFGVDGLQ DAIIAAGACL
HYLRDTEHPH LQHITNIQRI EQDDFLWMDR FTIRNLELLG SSVENGHTLL KTLDTTVTPM
GARLLKRWMV LPLRDIKQIN ERLDVTEHFI KETDLSRDVL QHLKQTGDLE RLVSKIPLRK
INPREVMMLA KALQQVEGIK QLLAKTGHPY LTAIGEKLNP CPGILCRILE QIVETPPILV
SKGGVIQNGI HTELDNLRTI AHSGKEYLLR IQQTESDATG IPSLKVAFNN VFGYYLEVTN
AHKSKVPENW IRKQTLANAE RYITPELKEY EEKIVGAEEK ILALEIQLFD ELLLALQPHI
QAIQQNAQLM ARLDCLLSFA NNAIQYKYRR PNVTEGYHLD IREGRHPVIE RGLPPGESYV
ANDIVLDKEE QQIIILTGPN MSGKSALLRQ TALITLMAHM GSFVPASAAE IGLTDKIFTR
VGASDNLSGG ESTFMVEMNE TASIINNITP RSLVILDEIG RGTSTYDGIS IAWSIVEYLH
DMTPHKPKTL FATHYHELNE LENKHGRIKN YHITNKESGN KVIFLRKLAP GGSRHSFGIH
VARMAGMPPQ LLQRANEVLS HLEQKHIDAP LEKHVKEMAG PTQKVQLSIF DAHSDTFKEI
RDMLNDVDIN RLTPVEALLK LNEIKNLL
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