| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_1810 |
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| Symbol | |
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| ID | 8357961 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 2210312 |
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| End bp | 2212696 |
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| Gene Length | 2385 bp |
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| Protein Length | 794 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 644963998 |
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| Product | glycoside hydrolase family 2 sugar binding |
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| Protein accession | YP_003121507 |
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| Protein GI | 256420854 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3250] Beta-galactosidase/beta-glucuronidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00809991 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTTGTT TGTTGATAGT TTTTCTTGTT TGTAGCTGTT GTATATCGGT AAAAGCGCAG
CGTGTACAGT CATTTGATGA CAACTGGTTA TTCTGGCGGG GTGCTGCACA GGGAGCAGAA
GATACTTTGT TTAAGGATAC AGACTGGCGT AAGGTATCCT TACCGCACGA CTGGAGTATT
GAAGATTTAC CAGGTACGCA GTCGCCTTTC AGTAAAGGTG CATTGAGTCA GGTGAGTGGC
GGTTTTACGA CGGGTGGTAC AGGTTGGTAC CGTAAGCATT TCAATGTACA GTTGACTGAT
AAGGGCAAAC GTATCGTGAT ACAGTTTGAT GGTGTATATA TGAATGCGCA GTTGTGGATC
AATGGTAAGA AGCTGGGAAA ACATCCTTAT GGATACACCT CTTTCTGGTA TGATATTACA
CCCTATGTGC GCTATGACAG AGAAAATATA CTGACTGTCA AAGTAAGGAA TGAAGGGGAG
AATAGTCGCT GGTATGCGGG TTCGGGCATA TACAGACATG TATGGATGAA TGTGCTTGAG
CCGGTGCATG TAGCGCAGTG GGGTACTTTT ATTACTACAC CCGATGTGAA TAAACAGCGT
GCTACCGTGA ACATAACAAC GCGTGTGAAC AATAATACAG CGACAGCTGT TACAGCTACT
TTATTAACAC GCGTGTTAGA TGCAAAAGGT AAAATAGTGG CAGCGAATAA AGGGCAGCAG
CTGATCGGCG CCGGAAAGGA TAGTGCATTG CAACAATCAT TCATTGTACC ATCCCCCTTG
TTATGGGATC TTACTTCTCC TGTATTATAC ACTGCGGTTT CCTATGTATA TGTGGATAAT
GTGTTGAAGG ATAGTGTGAC GACTCCTTTT GGTATCCGTA CGATTACAGC AGATGCACAA
AATGGGTTTC AGCTGAATGG TAAAACGATC AAACTCAAAG GCGGTTGTGT TCACCATGAT
AACGGTCCGC TGGGAGCTAA AGCATATGAC AGGGCAGAAG AAAGGAAAGT GGAACTACTG
AAATCCAGTG GTTATAACGC GATCCGTTGT TCACATAATC CACCATCACC CGCTTTCCTG
GATGCCTGTG ACAGACTGGG GATGCTGGTG ATAGACGAGG CGTTTGATAT CTGGAATGAT
GGTAAGAATC CGGAAGATTA TCACTTGTAT TTCGAAGAAT GGTGGCAGCG GGATATCGAG
AGTATGTTGT ATCGTGACCG GAATCATCCT GCTATTGTAA TGTGGAGTAC CGGTAATGAA
ATCCCGCATC GGGAAAAACC TGAGGTGGCA AAGGTAGCGC GTATGTTGCG CGATCATATT
CGCAGCATCG ATATAACACG TTTTATTACC TGTGGTGTAA ATGGTATTGC GCCTGATAAA
GATGCATTCC TTTCCACACT GGATATCGCA GGGTATAACT ATGCCCGTAC GCAATATGTA
AAAGATCATG AAAGGGTTCC CCAACGCGTG ATGATGGCGA CAGAATCCTT TGCCATCGAA
GCAGCAGACT ACTGGATGGA AGTAGTAGAT CATCCATGGG TAATCGGCGA TTTCGTATGG
ACGGCTTTTG ACTATATAGG AGAGGCCAGC ATCGGCTGGT TGGGATATCC ACAGCAACAA
AGTTTTTATC CATGGAATCT GGCCTATTGT GGTGATATCG ATGTCTGTGG ATGGAAACGT
CCGCAGTCTT ATTACAGAGA CGCATTGTGG ATGCCGGAAC AGCTGTCACT GTTTGTAAAA
CCACCTGTAC CTTCTTTTGA TACCAATACA CATAAAATAG AATGGAGTCA ATGGGAATGG
CATGATGCGA GAGATAGCTG GAACTGGGAA GGATATGAAG GTAAACCATT GGACGTAACG
GCTTATACTT CTTATGAGGA AGCAGAATTA TTCCTGAATG GAAAATCGCT TGGTCGTAAA
AAAGCAGGCA GAGAAAATAA GTTTATGGTG GTATGGCAGG CGCCGTATTC CCCTGGAAAA
CTCAGTGTTA TCGGGTATAA TGGTAAAAAG AAATCAAAAG AAGTAGTGTT GCAGACTGCA
GGTAAGACTA CTGCTATCAA GTTGTCGGCA GACAGGCAAC AGGTCCATGC AGACGGGCAG
GATCTGAGTT ATGTAACAAT TACACTGACA GATGCGGATG GTAATATTTC TCCTGATGCT
GCCCGGTTAT TACAATTCAG TATTAGCGGA CCAGGTACTA TTGTCGGTGT TGGGAATGCC
AATCCTATGA GTACAGAGAG TTGTCAGCAG TTACAGCGGA AAGCCTGGAG AGGTAAATGT
CAGGTGATTG TGAAAGCAGA CAAACAGGCC GGGGATATCC ACTTAACGGT GCAAGGTGCA
GGTCTGCCAG CAACAACAAT GAAGATTATC GCTACTGCCA AATAA
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| Protein sequence | MRCLLIVFLV CSCCISVKAQ RVQSFDDNWL FWRGAAQGAE DTLFKDTDWR KVSLPHDWSI
EDLPGTQSPF SKGALSQVSG GFTTGGTGWY RKHFNVQLTD KGKRIVIQFD GVYMNAQLWI
NGKKLGKHPY GYTSFWYDIT PYVRYDRENI LTVKVRNEGE NSRWYAGSGI YRHVWMNVLE
PVHVAQWGTF ITTPDVNKQR ATVNITTRVN NNTATAVTAT LLTRVLDAKG KIVAANKGQQ
LIGAGKDSAL QQSFIVPSPL LWDLTSPVLY TAVSYVYVDN VLKDSVTTPF GIRTITADAQ
NGFQLNGKTI KLKGGCVHHD NGPLGAKAYD RAEERKVELL KSSGYNAIRC SHNPPSPAFL
DACDRLGMLV IDEAFDIWND GKNPEDYHLY FEEWWQRDIE SMLYRDRNHP AIVMWSTGNE
IPHREKPEVA KVARMLRDHI RSIDITRFIT CGVNGIAPDK DAFLSTLDIA GYNYARTQYV
KDHERVPQRV MMATESFAIE AADYWMEVVD HPWVIGDFVW TAFDYIGEAS IGWLGYPQQQ
SFYPWNLAYC GDIDVCGWKR PQSYYRDALW MPEQLSLFVK PPVPSFDTNT HKIEWSQWEW
HDARDSWNWE GYEGKPLDVT AYTSYEEAEL FLNGKSLGRK KAGRENKFMV VWQAPYSPGK
LSVIGYNGKK KSKEVVLQTA GKTTAIKLSA DRQQVHADGQ DLSYVTITLT DADGNISPDA
ARLLQFSISG PGTIVGVGNA NPMSTESCQQ LQRKAWRGKC QVIVKADKQA GDIHLTVQGA
GLPATTMKII ATAK
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