Gene Cpin_1790 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_1790 
Symbol 
ID8357941 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp2172104 
End bp2173258 
Gene Length1155 bp 
Protein Length384 aa 
Translation table11 
GC content47% 
IMG OID644963978 
Producthypothetical protein 
Protein accessionYP_003121487 
Protein GI256420834 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGAAAA AATTCCCGTT ATTATTACTT GTACTCTGTT GCTGTATGCC ATTGTTTGCG 
CAGCAATTCA ATGGTCTGGA TATGAATATG GGTAACCTCT ACCGACTATC CAATGCGAAG
ACCCGCTCTA TCAGTCCTGA GAATTTTACC GGTGAAAAAG GAAAAGGCGG GATGGCTGTT
CCGCAGAAAG ATGCAGCGCC CAATACGGCT AATGCCACGG GGCCGGCACG TGAGCTGGGA
CAGGGATGGA AGGTGAATCC TTTTGTGATC ATCAAACCAG GGCAGACCTT TACGATGGCT
GAAATAACAG GTCCGGGTGC TATTCAGCAT ATCTGGATGA CACCTACAGG AGTATGGCGG
TATTCTATTC TGCGCGTGTA CTGGGATGAT GAAAAGGAGC CTTCTGTAGA ATGTCCGGTA
GGTGATTTTT TTGGAATGGC CTGGAATGAA TATGCACCAT TGAATTCAAT GGCGATCACT
GTCAATCCAG GAAGTGCTTT TAATAGCTAC TGGATGATGC CTTTCCGGAA GAAGTGCCGT
ATTACGATGG AAAACATCAA TACAGAGCAG ATGACGTTGT ATTACCAGGT GGACTATACC
CTGACGGATG TACCTGACGA TGCGGCTTAT TTCCATGCGC AATTCCGTCG TACCAATCCG
GATACCACAT CCGATTATGT GCTGGTGGAT AATATCAAGG GGAAGGGACA GTATGTGGGT
ACTTTTATGG CGCTGGGTGT GAATAACTCT GGCTGGTGGG GTGAAGGGGA GATTAAATTC
TTTATGGACG GAGATAATAA GTTTCCTACT ATCTGTGGTA CAGGTACGGA AGACTATTTC
TGCGGATCAT ACAATTTTGA CCGGGGAGGA AAGTATATGG AGTTTTGTAC ACCGTATGCG
GGTTTACATC AGGTGATACG GCCGGATGGC ACTTACCGGG CGCGTCAGCG GTTTGGTATG
TATCGCTGGC ATATTATGGA TCCTGTGCGT TTTGATAAGG ATCTGAAGGT CACTATACAA
GACCTCGGTT GGCGGGAAGG CGGCCGTTAT CTGCAGCAGC ATTCTGACAT CTCATCTGTG
GTGTACTGGT ACCAGACGGA GCCGCATCAG CCATTCCCAA AACTGCCTGT AAAAGACAAG
CTGGAAGTTT ATTGA
 
Protein sequence
MMKKFPLLLL VLCCCMPLFA QQFNGLDMNM GNLYRLSNAK TRSISPENFT GEKGKGGMAV 
PQKDAAPNTA NATGPARELG QGWKVNPFVI IKPGQTFTMA EITGPGAIQH IWMTPTGVWR
YSILRVYWDD EKEPSVECPV GDFFGMAWNE YAPLNSMAIT VNPGSAFNSY WMMPFRKKCR
ITMENINTEQ MTLYYQVDYT LTDVPDDAAY FHAQFRRTNP DTTSDYVLVD NIKGKGQYVG
TFMALGVNNS GWWGEGEIKF FMDGDNKFPT ICGTGTEDYF CGSYNFDRGG KYMEFCTPYA
GLHQVIRPDG TYRARQRFGM YRWHIMDPVR FDKDLKVTIQ DLGWREGGRY LQQHSDISSV
VYWYQTEPHQ PFPKLPVKDK LEVY