Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_1773 |
Symbol | |
ID | 8357924 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 2145767 |
End bp | 2147074 |
Gene Length | 1308 bp |
Protein Length | 435 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 644963961 |
Product | outer membrane efflux protein |
Protein accession | YP_003121470 |
Protein GI | 256420817 |
COG category | [M] Cell wall/membrane/envelope biogenesis [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1538] Outer membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 53 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTACCTT TTATGTTTTT GACAATGTGC GTAACGGCAC AACAACCTCA TGACACTACC AAACCGTTAC ATCTTACACT GGTGCAGATA TGGGAACAGG CAGAACTGAA CAACAAAAGG ATAGCTATGT CCCGTTTGCG CGTGGAAAGT AGTGAAGAAG CATTGAAAGA TGCGAAGGCG GAACGTCTGC CTGAAATCAA TGCTGCCGGC GCTTATGCCC GTGTGACAAA TATGCCTGTC TACGAAGATG GCCTCTTTCA TACACCAGAT CAGTTTCCCG TATTGCACAA CTTTTACAAA GTAGGCGGAG AAGCTTATTT CAACATTTAT AATGGCAATA AAACGAATCT TGAAATTAAG AAGGGAGCAA CGGAACATGC AATAGCAGAA GAACAAAAGA ACCTGACCGT ATCAGAAGTA AAATTCAATG CGGCGGTCTG TTACCTGGAT CTGGCACGCA GTTGCCGGTT TAAAGAACTG ATAGCAAAGG ACATTGAAGA ACAGGAAAGG CAACTCGTCC ACATCCAGGA ATTACAGAAA AATGGCGTTG TGCTGAAAAG CGATGTACTG AGAGCTACAC TGAAATTATC CCGTCAGAAG ATGGGCATGA TACAGATAGA AAATGACATC GCTATCGCAA GTCAGAAACT GGATTTAATG ATCGGCATAG ATGAACATGT ACTGATTCAG CCGGATAGCT CAATGACAAC AGATCTTGCT GTACCGGGTA CTTACGATGA CTACCTGGTA GCTGCCGCGG AACATGCGCA TGAATACAGG ATTTCAGAAC GGGAAACCGC ATTGAAAGAA CTGTCACTGA AACAGGTGAA AGCGAATGTC GCCCCCAGGA TAGGTCTGTT TGCAGAGTAC AACTGGTCCT ACCCGCAGAT CCAGTTTTAT CCTTATGGCG ACGCCGTGTA CGGATTAGGT ATGTATGGTG TGAAAGCTTC TTTCCCGATA TCCTCCTTCT ATCACAATAA ACACAAGGAA AAAGCAGCAA AACTGCAACT GGAAAGACAG GAAGTTGAGC ATAAAGAAAC AGGCGACGTT GTAAGACAAC AGGTCAACGA AGCTTACCTG CGTTATAAGG AAGCGCTTAC CCGTATTGAT GTGGCAGAAA CCAATATCAA ACAGGCAACA GAGAACCTCA GGATTGTAAA TAATACCTAT TTCAACCAGC TCTCCCTTGT TACAGATCTT TTAGATGCAG ATACACAAAT GCTGCAAACA AAATTTGACC TGGTATCAGC CAATATCGCT GCCCGCGTCA GATATTACCA GTTACAAAAA GTTATAGGCA ATTTATAA
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Protein sequence | MLPFMFLTMC VTAQQPHDTT KPLHLTLVQI WEQAELNNKR IAMSRLRVES SEEALKDAKA ERLPEINAAG AYARVTNMPV YEDGLFHTPD QFPVLHNFYK VGGEAYFNIY NGNKTNLEIK KGATEHAIAE EQKNLTVSEV KFNAAVCYLD LARSCRFKEL IAKDIEEQER QLVHIQELQK NGVVLKSDVL RATLKLSRQK MGMIQIENDI AIASQKLDLM IGIDEHVLIQ PDSSMTTDLA VPGTYDDYLV AAAEHAHEYR ISERETALKE LSLKQVKANV APRIGLFAEY NWSYPQIQFY PYGDAVYGLG MYGVKASFPI SSFYHNKHKE KAAKLQLERQ EVEHKETGDV VRQQVNEAYL RYKEALTRID VAETNIKQAT ENLRIVNNTY FNQLSLVTDL LDADTQMLQT KFDLVSANIA ARVRYYQLQK VIGNL
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