Gene Cpin_1770 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_1770 
Symbol 
ID8357921 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp2143000 
End bp2144583 
Gene Length1584 bp 
Protein Length527 aa 
Translation table11 
GC content45% 
IMG OID644963958 
Productpeptidase S8/S53 subtilisin kexin sedolisin 
Protein accessionYP_003121467 
Protein GI256420814 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1404] Subtilisin-like serine proteases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones52 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATTTTT ATCACATGAA TATTTGTAAG CCAGCGGCAG TCATTGCCAC ATTATTATTG 
TCAGGATTCG TTGCGGATGC ACAGAAACAT AACTGGCAGA GCATGGATCT TCAGAAAGAT
TCAGTATTTG GTATCAGTGC TGAAAAAGCT TATTCAGATC TGCTGAACGG CAAAAAGTCA
AGAACAGTAG TTGTGGCAGT CATCGACAGT GGTATTGACA CTACGCATGA AGACCTGAAA
AGCATCCTCT GGATTAATGC TAAAGAGAAG AGAGGAAATG GCAAGGATGA CGATAAAAAC
CATTATGCTG ACGATATTTA TGGATGGAAC TTCATCGGCT CTCCTAAAGG TAATGTTGAC
TTTGACAACC TGGAGCTGAC CCGTATCATC CGTCAACAAC AGAAACAATT CGGCAGTCTG
AACAGTGTAT CAAAAGATAC TGCCGGACTG TACCAGTATA AAATACTGAA GAACAAATAC
GATCTGAAAT TATCCGAAGC ACAGCAGACA CTGGTAGGGA TCAGCCGTTT TGTAGAGATG
CTCGATACCA TGCTGGTGAA GTTAGGCAAC CCTAACCCGA CAGCTGCAGA ATTACAGGCT
TATACACCGC AGAATCCTGC AGAAGGACAG ATCAAACAGG TAATCTCCGC ACAACTGGAC
CGTTATCCTG ATTTCAAGAC CTTCAGGACG ACAGAACTGG ATGCTGCTGT AAAACACTAT
AAAGAGCAGG TAGACTACTC CCTGAACCTG GATTATGATC CTCGTGCGAT AGTTGGCGAC
GACTATAGCA ATGCAACAGA AAGATATTAT GGTTCCGGTG ATGCTACCGG TCCGGATGCA
GATCACGGTA CACACGTAGC AGGTATCATC GGCGCTGGCA GAAATAACAA CCTGGGTATT
GACGGTATTG CTGACAACGT ACGTATCATG TCAGTAAGAG CTGTACCGAA TGGTGACGAA
AGAGATAAAG ACGTAGCAAA CGCGATCCGT TATGCAACAG ATAATGGCGC TAAAGTGATC
AATATGAGCT TCGGCAAGTC TTATTCTCCT AACAAGGATG TAGTAGATGA AGCGGTAAAA
TACGCTATCT CCAAAGACGT ACTGCTGGTA CATGCCGCAG GTAACGATGC AGAAAACAAT
GACGTTACGC CTAACTATCC AAGCCGTGTA TACCAGAACG GTGACACCGC TACTGCATGG
ATCGAGGTAG GCGCTTCTGG TCCGGAAGAT AATGAAACAC TGGCTGCACC TTTCTCTAAT
TACGGTAAAA TAAACGTGGA TGTTTTTGCA CCAGGTGTTG GTATCTACTC TTCCACTCCG
GGTTCTCACT ACGAATATCA TGATGGTACC AGTATGGCAG CGCCTGTTGT AGCTGGTCTG
GCAGCCCTGA TCCGCTCTTA TTATCCAAAA CTGAGCGCAG TTCAGGTAAA GGATATCATC
CTGAAATCTG TGGTGAAAGT TGAGCATCCG GTGACCATTA TGGTAGAAGA CCAGCCTAAA
TCTGTACAGA TGACGGACCT GTGTCGTACA GGTGGTGTGG TAAATGCTTA CAAAGCATTG
GAACGGGCTG CCACTTACAA ATAA
 
Protein sequence
MNFYHMNICK PAAVIATLLL SGFVADAQKH NWQSMDLQKD SVFGISAEKA YSDLLNGKKS 
RTVVVAVIDS GIDTTHEDLK SILWINAKEK RGNGKDDDKN HYADDIYGWN FIGSPKGNVD
FDNLELTRII RQQQKQFGSL NSVSKDTAGL YQYKILKNKY DLKLSEAQQT LVGISRFVEM
LDTMLVKLGN PNPTAAELQA YTPQNPAEGQ IKQVISAQLD RYPDFKTFRT TELDAAVKHY
KEQVDYSLNL DYDPRAIVGD DYSNATERYY GSGDATGPDA DHGTHVAGII GAGRNNNLGI
DGIADNVRIM SVRAVPNGDE RDKDVANAIR YATDNGAKVI NMSFGKSYSP NKDVVDEAVK
YAISKDVLLV HAAGNDAENN DVTPNYPSRV YQNGDTATAW IEVGASGPED NETLAAPFSN
YGKINVDVFA PGVGIYSSTP GSHYEYHDGT SMAAPVVAGL AALIRSYYPK LSAVQVKDII
LKSVVKVEHP VTIMVEDQPK SVQMTDLCRT GGVVNAYKAL ERAATYK