| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_1754 |
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| Symbol | |
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| ID | 8357904 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 2126990 |
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| End bp | 2128708 |
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| Gene Length | 1719 bp |
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| Protein Length | 572 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 644963941 |
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| Product | thiamine pyrophosphate protein domain protein TPP-binding |
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| Protein accession | YP_003121451 |
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| Protein GI | 256420798 |
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| COG category | [G] Carbohydrate transport and metabolism
[H] Coenzyme transport and metabolism
[R] General function prediction only |
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| COG ID | [COG3961] Pyruvate decarboxylase and related thiamine pyrophosphate-requiring enzymes |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAAACG AAACATTTAC CGTCGCGGAT TATTTATTAA CCCGGCTTAG ACAATTGAAT
GTTACAGAAG TCTTCCAGAT CCCCGGAGAT TATGTAAAGC ACTTTACACA AACATTGGAA
CATTTCCCCG GCGTGAATGC GGTTGGCGCT ATCAATGAAC TGGATGCTGC TTATGCTGCG
GATGCATATG GCCGTACCCG TGGACTGGGC GCTGTATCCC TGCAATATGG GGTAAGTACT
TTCATTGCAT TAAACGCAAT CGGTGGCGCT TATGTGGAGC GGAGTCCCGT TGTGGTTATT
TCTGCTACTC CCGGAGCTGA TGCAAGACAG ATCACAAAGA TGTATGACGT GTTGTATCAT
CACTCAACCG GTAATCTTGC TGCGGATCAG GAAGTCTATG ATCAGGTAAC CGTTGCTTGT
GAAACACTGA GTACTTCAGC AGGGGCTGCG GAAAAGATTG ATCAGCTGAT CGTAGCTGCC
CTGACCTATA AGCGGCCGGT ATTCATTGAG TGTTACAAAG AAGTATGGGG AGAACCCTGC
GTACGTCCTT CAGAAACACC ACTGGAAGCG ATCAAATTCG TAAGCGAACC ACTGGCGCTG
GAGAACGCAG TCAATACAGC ATGGGCACAG CTGACAGCGG CACAGAAACC CCTGATCTTT
GCAGGCGTGG AAGTATTACG TCACGGACTT TCCCCGCTTT TACAGGAACT GATCGACGTC
AGCGGATATC TTTACACCAC CACCAGTTTG GGTAAAACGG TCCTGGATGA AGGTGGTAAT
AAATTTATCG GCACTTATTC TGACCAGGCT TCTATCGAAA GCGTACGTAA CCTGGTGGCG
GAATCGGATT GTTTCCTGAC ACTGGGTACT ATTATCACAG ATGACTATCT GTGGTTCATA
GAAAACAAGT ACGCAGATAT GGTACTGGCT ACTACCGAAC TCGTAAGAGT GGGGTACTTC
ATCTATGAAG AAGTGACCAT GGAAGATTTC ATGCGTGCAC TGATCGACCG TTTCAAACTA
CACGGGGCGC CTTATCCCTT GAATGTAACA GCGCCGCCAC AGCCGCCTTA CCCCGAACCA
TGGATCTCCA ATTCGGATCC TGTTTTTGAT GTGGAACCGC ACGTCCTCAC GTACAACCGC
TTCTTCCAGC ATACCATGAA ATTCCTGAAT GACCAGAATA TGCTGCGAGA TATCGTCTGG
ACATTTGGGA TCAGCTCTGC CATGTATGTA GCAACCAATG CTTACGGATT ACCACAGAAC
AGTTTTCTCT CTTCAGCTGC CTGGCAGATC ATCGGTTATG AAACCGGCGC TACTACCGGT
GCACAGCTGG GTAGTGGTAA AAGGGCATGG GCTGTAGCAG GTGACGGCGG CTTTATGACG
GTATGCCAGT CGTTATCCAC ATTGGCCAGA AATAACCTCA ATGCAGTCGT ATTTGTAATG
AGTAATGCGG TATATGCTAT CGAACAGGTA TACGTGAATA TGGATGCCTT TAAACCGGGT
CCGGAACACA AATTCGATAC GTTCGATCTC CTGCCGAAAT GGGATTACAT CGCGCTGGCA
CAGGCATTTG GTGCACAAGG CTTCCGGGTT ACTACGGTAA AGGAACTGGA AGACCTGCTC
CCTACTATCG CTGCAATAAC TAATCAGCCG GCACTGGTAG AAGTCGTTAT TCCTCAGAAA
GACCTGCCTG GACAGATGCG TCGTCTTGGC CTTGAATAA
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| Protein sequence | MQNETFTVAD YLLTRLRQLN VTEVFQIPGD YVKHFTQTLE HFPGVNAVGA INELDAAYAA
DAYGRTRGLG AVSLQYGVST FIALNAIGGA YVERSPVVVI SATPGADARQ ITKMYDVLYH
HSTGNLAADQ EVYDQVTVAC ETLSTSAGAA EKIDQLIVAA LTYKRPVFIE CYKEVWGEPC
VRPSETPLEA IKFVSEPLAL ENAVNTAWAQ LTAAQKPLIF AGVEVLRHGL SPLLQELIDV
SGYLYTTTSL GKTVLDEGGN KFIGTYSDQA SIESVRNLVA ESDCFLTLGT IITDDYLWFI
ENKYADMVLA TTELVRVGYF IYEEVTMEDF MRALIDRFKL HGAPYPLNVT APPQPPYPEP
WISNSDPVFD VEPHVLTYNR FFQHTMKFLN DQNMLRDIVW TFGISSAMYV ATNAYGLPQN
SFLSSAAWQI IGYETGATTG AQLGSGKRAW AVAGDGGFMT VCQSLSTLAR NNLNAVVFVM
SNAVYAIEQV YVNMDAFKPG PEHKFDTFDL LPKWDYIALA QAFGAQGFRV TTVKELEDLL
PTIAAITNQP ALVEVVIPQK DLPGQMRRLG LE
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