| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_1750 |
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| Symbol | |
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| ID | 8357900 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 2119885 |
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| End bp | 2122284 |
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| Gene Length | 2400 bp |
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| Protein Length | 799 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 644963937 |
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| Product | glycoside hydrolase family 2 sugar binding |
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| Protein accession | YP_003121447 |
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| Protein GI | 256420794 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3250] Beta-galactosidase/beta-glucuronidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.266085 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATCTGA TTAAGACTGC TAGTGTATGT TTATTAAGTG TCGTGCTTGG TCAGGGCGTT
ATGGCGCAGA CCGGCTGGAA AGCACAGTCC TCAACAATCA AAACCCGTTG GGCACAGGAA
GTATCCCCAA CCAATGTCCT CCCGGAGTAC CCTCGCCCAC AGATGGTGCG TGAGAACTGG
CAAAACCTGA ATGGCCTGTG GCAATATACC ATTACCCCCA AAGACGCCGC CATGCCATCC
GCCTTTGCGG ATCAGATACT CGTGCCGTTT CCGCTGGAAT CTGCACTTTC AGGCGTAAAA
AAGCCGCTGC TGCCTACACA ACACCTCTGG TACAAGCGCA CATTTGTACA AACGCCTCTG
AAAAACGGCG AACACGTGTT ATTACATTTC GGCGCCGTAG ACTGGCAGGC GACTGTCTAT
GTAAACGGTA AAGAAACAGG TACACACGCT GGCGGTTATC AGTCTTTCTC ACAGGATATT
ACCGCTGCCC TGAAAGACGG AGAAAATGAA ATTGTAGTAA AGGTTTATGA CCCTACCAGT
GAAGGCATTG GCCCTCACGG TAAACAGGTA CTGAACCCGG CTAATATCTA TTATACACCT
TCTTCCGGTA TCTGGCAGAC CGTCTGGATG GAAACAGTGC CTGCAGCCTA TATCGCAGGA
CTGACCCTTA CTCCCGACGT AGACAAAAAC GTCCTGAACG TGAGCGTAAA CGCGCCGGCA
GGTACTAATG TAGAACTGAT CGCCACTGAT AACGGCACAG AAGTCAGCAA AATAAAAGGC
AAAGCAGGCG TACCATTGAA ACTGCCTGTG AAGAACGCGA AACTGTGGTC TCCTGCCAGC
CCTTTCCTGT ATGATCTCAC CGTAAAACTC AGCAAAGGCG GCAAAACAGT TGATGAAGTA
AAAAGCTACT TCGGGATGCG TAAAATCGCC ATTCAGAAAG ATGAAAAAGG CGTTGACCGC
ATCTTCCTGA ATAACAAACC ATACTTCAAT CTGGGTACCC TGGATCAGGG TTTCTGGCCT
GACGGACTGT ACACCGCCCC TACCGATAAT GCGCTGAAAT TTGATATTGA AGCCATTAAA
GCAATGGGTT TTAATACCAT CCGTAAACAT ATCAAGGTTG AACCAGCCCG CTGGTATTAT
CATACAGACA AACTGGGGAT GCTGGTATGG CAGGATTTCG TGAATCCTAA CCAGGGATTA
CCGGAAGGCG CTAAAGCGGA GTATGAGAAA GAAACCAAAG AAACGCTGGA ACAACTGCAT
AATTACCCTT CTATCACTAC CTGGGTAATC TTTAATGAGA AATGGGGTGC CTATGATCAG
CAGCGTATCA CTGAATGGGT GAAAAGCGCG GATCCTTCCC GTATCGTAAA TGGTCACTCC
GGTGAAATGC TGTATGTAAA TGAACAACTG CGCAGCCCGT CTCCGAATGC ATGGGTAAGT
GCAGATATGA CCGACGTACA CTCCTACCCT GACCCGATGA ACGCACCCGC AGAACCAGGT
AAAGCAAGGG TATTGGGTGA GTTTGGCGGT ATCGGTGTAT TCATTCCTGA ACACCAATGG
AATACCGGCA GCGCCTGGGG ATATATACAG GAAAAACCAG CTGCACTGGC GGCTAAATAT
AACATCATGA ACCAGCACCT GAAACTGCTG GAAGCAGATG GCTTGTCCGG CTCAATCTAT
ACACAGCCTT TTGATGTGGA AGGTGAGCAG AACGGCTTAT TAACGTACGA CCGTGAAGTG
GTTAAAATCC CGTTTGAGCA GATGCGTAGT ATCCATGCAT CACTGAACCC TGATCTGGGT
ACTGTACCAC AGGTAACCGC CATGAATGCA GACCTGACCG ACCCGATCGT CGCCTACAGT
AAAATGCTGC AGGAATACGT AGGGGGCCGC CGCGATGCCT CATTCCTCTT CAAGCTCGCT
ATGATGGCAA AACAGGCTGG CGATAAAGAA GGCGCTAACC TGGCCGGCAG TGCCTATATT
GCCTCATTAC ACGCTCCTTA TACGCCTGAA CAGCTGGATC TGATCCTTCA GTTCACCAAC
AGTACAAAAG ACAAAGGTTT TGCTGTATTA CAGCAACAAT TGCAATCCAG CAATCCTCAG
TTAGAGAAAA GACCGGTGAC TGTGAAACTG ATGAATATCG TATTCAAAGA CGTGATCGAC
CCTGTATTGC AGAAGAGTGC AGATCCTGAC TGGTCAGCTA TTGCCAACAG CATTAAACCT
TATGGCGATC CGGGTGACGA GATCTATCTG CGTGCCAAAA CCGTGTATAC TTTCAATAAA
CAGGACTGGT CTAACTATGC TTCCGCAGCA AATACCTACC TGGAAAAATA CGGACAGAAC
ATTCCTGAAC AGGAAAGAAA TATGTTCCGT CAGGCTATTG ACAACAATAA GAACCAATAA
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| Protein sequence | MNLIKTASVC LLSVVLGQGV MAQTGWKAQS STIKTRWAQE VSPTNVLPEY PRPQMVRENW
QNLNGLWQYT ITPKDAAMPS AFADQILVPF PLESALSGVK KPLLPTQHLW YKRTFVQTPL
KNGEHVLLHF GAVDWQATVY VNGKETGTHA GGYQSFSQDI TAALKDGENE IVVKVYDPTS
EGIGPHGKQV LNPANIYYTP SSGIWQTVWM ETVPAAYIAG LTLTPDVDKN VLNVSVNAPA
GTNVELIATD NGTEVSKIKG KAGVPLKLPV KNAKLWSPAS PFLYDLTVKL SKGGKTVDEV
KSYFGMRKIA IQKDEKGVDR IFLNNKPYFN LGTLDQGFWP DGLYTAPTDN ALKFDIEAIK
AMGFNTIRKH IKVEPARWYY HTDKLGMLVW QDFVNPNQGL PEGAKAEYEK ETKETLEQLH
NYPSITTWVI FNEKWGAYDQ QRITEWVKSA DPSRIVNGHS GEMLYVNEQL RSPSPNAWVS
ADMTDVHSYP DPMNAPAEPG KARVLGEFGG IGVFIPEHQW NTGSAWGYIQ EKPAALAAKY
NIMNQHLKLL EADGLSGSIY TQPFDVEGEQ NGLLTYDREV VKIPFEQMRS IHASLNPDLG
TVPQVTAMNA DLTDPIVAYS KMLQEYVGGR RDASFLFKLA MMAKQAGDKE GANLAGSAYI
ASLHAPYTPE QLDLILQFTN STKDKGFAVL QQQLQSSNPQ LEKRPVTVKL MNIVFKDVID
PVLQKSADPD WSAIANSIKP YGDPGDEIYL RAKTVYTFNK QDWSNYASAA NTYLEKYGQN
IPEQERNMFR QAIDNNKNQ
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