Gene Cpin_1749 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_1749 
Symbol 
ID8357899 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp2118892 
End bp2119434 
Gene Length543 bp 
Protein Length180 aa 
Translation table11 
GC content43% 
IMG OID644963936 
Productprotein of unknown function DUF1349 
Protein accessionYP_003121446 
Protein GI256420793 
COG category[S] Function unknown 
COG ID[COG3506] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.335138 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGTGGA ATAACGAACC CAAAAACTGG TCAGGTAATG AAACAAAACT CAGTTGTACC 
ATTGAACCAG ACACCGACTA TTGGCGGATC ACACATTATG GTTTTATCCG TGATAACGGT
CCCTTTTATT ATAAAGAAAT GACAGGGAAT TTTGAAGCCG GCGTAAAGAT CAGCGGACAG
TATACAGAAC TGTTTCACCA GGCTGGCTTA ATGGTCAGAA TTGATGAAAA GAACTGGATC
AAAACCGGTA TTGAATACGT GGATGGTGTA CAGAATGTAA GCGCCGTCGT TACCCGTGAA
GTGTCTGACT GGTCTGTGAT ACCCAGACAT GACAGTCCGG CTGCTATCTG GCTGACCTTA
CTCCGAAAAG GCGATTATGT AGAGATAAAA TACTCTTTTG ATGGCGTGAA ATATGAGATG
TTGCGACTGG CTTATTTTCC GCCTGATGTA AAGGCAGGTA TTGGTATTGT GGCTGCGGCT
CCGGGAAAGG AATCGTTTGA GGTGGTATTT GAAGATTTTC AGGTGAAAGA AATTAAGAAT
TAA
 
Protein sequence
MKWNNEPKNW SGNETKLSCT IEPDTDYWRI THYGFIRDNG PFYYKEMTGN FEAGVKISGQ 
YTELFHQAGL MVRIDEKNWI KTGIEYVDGV QNVSAVVTRE VSDWSVIPRH DSPAAIWLTL
LRKGDYVEIK YSFDGVKYEM LRLAYFPPDV KAGIGIVAAA PGKESFEVVF EDFQVKEIKN