Gene Cpin_1684 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_1684 
Symbol 
ID8357827 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp2030467 
End bp2031327 
Gene Length861 bp 
Protein Length286 aa 
Translation table11 
GC content45% 
IMG OID644963864 
Producthypothetical protein 
Protein accessionYP_003121381 
Protein GI256420728 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGGAAAA TACGTGTTTA TTATATCCTG ATAATATTGA TCCTGCCATT ATATGCAAAC 
GCACAGCAAT CTGTACCGGC TGAGAAATGG GATTCTATGG TAGCAGCAGA TATGGAGCAG
ACGGTTACAC AAAAAGAAGC GGACGAGGTA GCCGATGATT CGGCACTGGC AGCCACAACG
GATAAAGTTG TGCAGGAACA TTACCTGTGG GACCAGGTCG CGCCGGTCAT CGCAGATACA
ATAGAAACTT ATGCGGATTA TCCGCTTGTT GTACGTAGCG TACCGGATAC GATGATGAAA
GTGCTGCAAA AGGATAAAAA GCTGCAATAC ACACTTAAAA AGAAAGAGCC GCCTCGCCGC
AGCGCTGGCT GGGATAGCTT TCTGAACGCT GTTTTTAACT TCATCCGGGC CATACACAAA
CTGATCATTG TGGTTGTCGT GGCCTTTTTG GGCTGGTTGC TCTTTCTTTA TCTTAAACAG
AATGGTTATC TGTTTAAGAA AACGGCACAG GAGGCAGGGA ATGAGGTAAA ACTGACAGAA
GAAGAACTGG ATGTTGAAAC CTATCAGCAG CAGATAGAAG AAGCGATCGC TGCCGCCAGA
TTCAGACAGG CCGTAAGACT GCTTTATTTG CAAACACTAC GTGTACTGAT CGATAAAGAA
GTGGTTACCT TTAGCAGGGA GAAAACAAAT GCCGCTTATC TGCGTAGTAT GTTGTCAACA
CCGTGGTATA AGAAATTTGC CGTGCTGACA TTGAATTATG AATACATCTG GTACGGAGAA
ACTCCGGTGA ATGGTCAGCA GTTTGGTGAT CTGCACAAAG AGTTCCGTCA ATTTATGAAC
GAATTAGGCT ATACCCGGTG A
 
Protein sequence
MRKIRVYYIL IILILPLYAN AQQSVPAEKW DSMVAADMEQ TVTQKEADEV ADDSALAATT 
DKVVQEHYLW DQVAPVIADT IETYADYPLV VRSVPDTMMK VLQKDKKLQY TLKKKEPPRR
SAGWDSFLNA VFNFIRAIHK LIIVVVVAFL GWLLFLYLKQ NGYLFKKTAQ EAGNEVKLTE
EELDVETYQQ QIEEAIAAAR FRQAVRLLYL QTLRVLIDKE VVTFSREKTN AAYLRSMLST
PWYKKFAVLT LNYEYIWYGE TPVNGQQFGD LHKEFRQFMN ELGYTR