Gene Cpin_1660 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_1660 
Symbol 
ID8357802 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp1999074 
End bp2000411 
Gene Length1338 bp 
Protein Length445 aa 
Translation table11 
GC content46% 
IMG OID644963840 
Productacetyl-CoA carboxylase, biotin carboxylase 
Protein accessionYP_003121357 
Protein GI256420704 
COG category[I] Lipid transport and metabolism 
COG ID[COG0439] Biotin carboxylase 
TIGRFAM ID[TIGR00514] acetyl-CoA carboxylase, biotin carboxylase subunit 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTAAGA AAATATTGAT TGCCAATCGT GGAGAGATCG CCCTGCGTAT CATTCGCACC 
TGTAAGGAAA TGGGTATCAA AACGGTGGCT GTTTACTCTA CCGCAGATAA AGATAGTCTG
CACGTAAAGT TTGCAGATGA AGCGGTGTGT ATAGGTAAAC CACAAAGCAG CGAATCCTAT
CTGAATATAC CTCACCTGAT GGCGGCAGCA GAAATAACCA ACGCTGATGC AATCCACCCA
GGTTACGGTT TCCTCGCAGA AAATGCGCGC TTTGCAGAGA TCTGTGGCGA ACACGGTATC
AAATTTATCG GCCCGACTCC GGAGATGATC CGTAAAATGG GTGATAAAAT GACTGCGAAA
GAAACAATGA TCGCAGCAGG TGTACCTGTA ATCCCAGGTT CTGAAGGCCT CCTCCAGAGT
CTGGAAGAAG CTAAGAAACT TTCCAAACAA ATGGGCCTGC CTATCATCCT GAAAGCAACT
GCTGGTGGTG GTGGTAAAGG TATGCGTGTG GTATGGAAAG ACGAAGAGCT GGAGAATGCC
TACAACATGG CTAAAAATGA AGCCCGCGCC TCTTTCAATA ACGACGGTAT CTACATGGAG
AAATTCGTGG AAGAACCTCG TCACATTGAA ATACAGGTAG CAGGCGACCA ATATGGTAAA
GTATGTCACC TCAGTGAGCG TGACTGCTCT ATCCAGCGTC GTCACCAGAA ACTGGTAGAA
GAATCTCCTT CTCCTTTCAT GACGCCTGAA CTGCGTGAGA AAATGGGTGA AGCAGCGATC
AAAGCAGCAT CAGCTATCAA TTACGAAAGT GTTGGTACCA TCGAGTTCCT GGTGGATAAA
CACCGTAACT TCTACTTCAT GGAGATGAAC ACCCGTATCC AGGTAGAACA CGGCGTAACA
GAAGAGGTAA TCAATTTTGA CCTGATCAAA GAACAGATCA AGATTGCTGC CGGTATTCCT
ATCTCCGGTA AGAACTATAC ACCGGAAATG CACGTAATCG AATGTCGTAT CAATGCGGAA
GATCCGTACA ACGACTTCCG TCCGTCTCCA GGTAAGATCA CTACCCTGCA TATTCCAGGT
GGTCACGGTG TACGTGTGGA TTCCCACATC TACGCTGGTT ATGTGATTCC TCCGTATTAT
GATTCAATGG TGGCTAAACT GATCACTATT GCACAGACCC GTGAGGAAGC TATCAACACC
ATGGAGCGTG CACTGAGCGA ATTTGTGATC GAAGGGGTGA AAACAACCAT TCCTTTCCAT
CAGCAGCTGA TGCGTGATGA AAACTTCCGT AAAGGTAACT TTACGACCAA ATTTACAGAA
ACTTTCAAAC TGGTATAA
 
Protein sequence
MFKKILIANR GEIALRIIRT CKEMGIKTVA VYSTADKDSL HVKFADEAVC IGKPQSSESY 
LNIPHLMAAA EITNADAIHP GYGFLAENAR FAEICGEHGI KFIGPTPEMI RKMGDKMTAK
ETMIAAGVPV IPGSEGLLQS LEEAKKLSKQ MGLPIILKAT AGGGGKGMRV VWKDEELENA
YNMAKNEARA SFNNDGIYME KFVEEPRHIE IQVAGDQYGK VCHLSERDCS IQRRHQKLVE
ESPSPFMTPE LREKMGEAAI KAASAINYES VGTIEFLVDK HRNFYFMEMN TRIQVEHGVT
EEVINFDLIK EQIKIAAGIP ISGKNYTPEM HVIECRINAE DPYNDFRPSP GKITTLHIPG
GHGVRVDSHI YAGYVIPPYY DSMVAKLITI AQTREEAINT MERALSEFVI EGVKTTIPFH
QQLMRDENFR KGNFTTKFTE TFKLV