Gene Cpin_1631 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_1631 
Symbol 
ID8357773 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp1972671 
End bp1973024 
Gene Length354 bp 
Protein Length117 aa 
Translation table11 
GC content44% 
IMG OID644963811 
Productribosomal protein L18 
Protein accessionYP_003121328 
Protein GI256420675 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0256] Ribosomal protein L18 
TIGRFAM ID[TIGR00060] ribosomal protein L18, bacterial type 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACAA AAGTTAATAG GAGACAGAAG ATCCGCTACC GCATCCGTAA AAAGTCTGTA 
GGTAGTTCAC AGAAGCCGAG ATTATCTGTA TTTCGCAGCA ATAGCGACAT TTACGTGCAA
TTGATAGATG ACGCTAACGG CGTTACTCTG GCTGCTGCTT CTTCCCGTGA TAAAGATATC
CAGGCACAGA AAGGTACTAA ATCCGAGAAA TCTAAACTCG TAGGTGCTGC TCTGGCTACT
AAAGCAAAAA ATCTGGGTAT TACTACCTGC GTTTTTGATC GTGGTGGTTA TCTGTATCAT
GGTCGCGTAA AAAGCGTAGC TGATGGCGCT AGAGAAGGTG GCCTTCAATT CTAA
 
Protein sequence
MSTKVNRRQK IRYRIRKKSV GSSQKPRLSV FRSNSDIYVQ LIDDANGVTL AAASSRDKDI 
QAQKGTKSEK SKLVGAALAT KAKNLGITTC VFDRGGYLYH GRVKSVADGA REGGLQF