Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_1612 |
Symbol | |
ID | 8357754 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 1958036 |
End bp | 1960183 |
Gene Length | 2148 bp |
Protein Length | 715 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 644963792 |
Product | translation elongation factor G |
Protein accession | YP_003121309 |
Protein GI | 256420656 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0480] Translation elongation factors (GTPases) |
TIGRFAM ID | [TIGR00231] small GTP-binding protein domain [TIGR00484] translation elongation factor EF-G |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCAGACT TAAAATTTCA AAGAAACTTT GGTATTGCGG CGCACATTGA TGCCGGTAAA ACCACTACCA CAGAGCGTAT CCTGTACTAC ACAGGTAAAT CCCACAAAAT AGGGGAAGTG CACGAAGGTG CTGCCACCAT GGACTGGATG GCACAGGAGC AGGAGAGAGG TATTACCATC ACATCTGCTG CTACTACATG TTTCTGGAAA TTCCCGACTA CACAGGGAAA GCTTCAGCCA GACACTAAAG AATACAAATT CAACATCATC GACACTCCGG GTCACGTGGA CTTTACCGTT GAGGTAGAGC GTTCCCTGCG TGTACTGGAT GGTCTGGTAG CACTGTTCTG CGCTGTATCT GGTGTAGAAC CACAGTCTGA AACCGTTTGG CGCCAGGCTA ACCGTTACCG TGTACCTCGT ATCGGTTTCG TTAACAAAAT GGACCGTGCG GGTGCTGACT TCCTGAACGT GGTAAAACAG GTGAAGGAAA TGCTGGGTGC TAACCCTGTT CCGTTGATGC TCCCTATCGG TGCTGAAGAT ACTTTCAAAG GTGTGGTTGA CCTGATCACC ATGAAAGGTA TCATCTGGGA CGAAGAAGGT AAAGGTGCTA CTTACCAGGA AATCGAAATT CCTGCTGACA TGAAAGATGA AGCAGAAGAA TGGAGAGGTA AACTGGTAGA GGCAGTTGCT GAGTACGACG ACACCCTGAT GGAGAAATTC TTCGAAGATC CAAATTCAAT CTCTGAAGCT GAGATCCACG AAGCTATCCG TAAGGCTACT ATCGATATCG CTATCATCCC GATGCTGTGT GGTTCTTCCT TCAAGAACAA AGGTGTTCAG AAGATGCTGG ATGCGGTTTG CCGTTACCTG CCTTCTCCAC TGGATATCGA AGCAGTAAAA GGTACTAATC CTGACACTGG CGCTGAGATC GAGCGTAAAC CAGATGCAAA AGAACCATTC TCTGCACTGG CGTTCAAGAT CATGACCGAT CCTTTCGTAG GTCGTCTGGC GTTCTTCCGG GCTTATTCCG GTCACCTGGA TGCAGGTTCT TATGTACTGA ACACCCGTAC TGGTAAGAAC GAGCGTATCA GCCGTATCAT GCAGATGCAC GCCAACAAGC AGAACCCGAT CGATTTCATC GAAGCTGGTG ATATCGGTGC TGCTGTAGGT TTTAAAGATA TCAAAACAGG TGATACCCTG TGTAACGAAG ATCATCCGAT CGTTCTGGAA TCTATGACAT TCCCTGAGCC TGTAATCCAC ATCGCTATCG AGCCAAAAAC TCAGGCGGAC ATGGATAAAA TGGGTCTGGC GATCGCGAAA CTGGTAGAGG AAGATCCTAC CCTGAAAGCA AAAACTGACG AAGAAACCGG CCAGACTGTA TTGAGCGGTA TGGGTGAGCT TCACCTGGAA ATCATCGTTG ACCGTATGCG TCGCGAATTC AAGGTAGAAG TTAACCAGGG TGCGCCTCAG GTTGCGTTCA AAGAAGCACT GACTGGCGTT GTTACACACC GTGAAGTGTA CAAGAAACAG ACGGGTGGTC GTGGTAAATT CGCTGACATC CAGATCGAGA TCGGACCTGC TGATCCGGAA TGGCTGAAAG AGAACGACGG TAAAACGTTC CAGTTCATCA ACGATATCTT CGGTGGTTCC ATTCCAAAAG AATTCGTTCC TCCGGTACAG AAAGGTTTCG AATCTGCAAT GAACCAGGGT GTTCTGGCAG GCTTCCCGCT GGATAACCTG AAAGTTCGTC TGTTCGACGG TTCCTTCCAC CAGGTGGATT CCGATGCAGT ATCATTCGAG CTTTGTGCAA GAGCAGCTTT CCGTGAGGCT GGCCGTAAGG CGAAACCAGT TCTGCTGGAG CCAATCATGA AGGTTGAAGT ACAGACTCCT GACCAGTACA TGGGTGACGT AACAGGTGAC CTGAACCGTC GTCGTGGTAT GCTGGAAGGT ATGGAAATGA GAAATGGTGT ACAGGTAATC AAAGCTAAAG TTCCACTGAA AGAAATGTTC GGCTACGTAA CTCAGCTGCG TTCCATGTCA TCAGGTCGTG CGACTTCCAT CATGGAGTTC TCTCATTACT CAGCAGCTCC AAACAGCATC GCTGAAGAGG AAATTGCAAA AACAAAAGGT AAAGTGAACG CTGACTAA
|
Protein sequence | MADLKFQRNF GIAAHIDAGK TTTTERILYY TGKSHKIGEV HEGAATMDWM AQEQERGITI TSAATTCFWK FPTTQGKLQP DTKEYKFNII DTPGHVDFTV EVERSLRVLD GLVALFCAVS GVEPQSETVW RQANRYRVPR IGFVNKMDRA GADFLNVVKQ VKEMLGANPV PLMLPIGAED TFKGVVDLIT MKGIIWDEEG KGATYQEIEI PADMKDEAEE WRGKLVEAVA EYDDTLMEKF FEDPNSISEA EIHEAIRKAT IDIAIIPMLC GSSFKNKGVQ KMLDAVCRYL PSPLDIEAVK GTNPDTGAEI ERKPDAKEPF SALAFKIMTD PFVGRLAFFR AYSGHLDAGS YVLNTRTGKN ERISRIMQMH ANKQNPIDFI EAGDIGAAVG FKDIKTGDTL CNEDHPIVLE SMTFPEPVIH IAIEPKTQAD MDKMGLAIAK LVEEDPTLKA KTDEETGQTV LSGMGELHLE IIVDRMRREF KVEVNQGAPQ VAFKEALTGV VTHREVYKKQ TGGRGKFADI QIEIGPADPE WLKENDGKTF QFINDIFGGS IPKEFVPPVQ KGFESAMNQG VLAGFPLDNL KVRLFDGSFH QVDSDAVSFE LCARAAFREA GRKAKPVLLE PIMKVEVQTP DQYMGDVTGD LNRRRGMLEG MEMRNGVQVI KAKVPLKEMF GYVTQLRSMS SGRATSIMEF SHYSAAPNSI AEEEIAKTKG KVNAD
|
| |