Gene Cpin_1612 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_1612 
Symbol 
ID8357754 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp1958036 
End bp1960183 
Gene Length2148 bp 
Protein Length715 aa 
Translation table11 
GC content48% 
IMG OID644963792 
Producttranslation elongation factor G 
Protein accessionYP_003121309 
Protein GI256420656 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0480] Translation elongation factors (GTPases) 
TIGRFAM ID[TIGR00231] small GTP-binding protein domain
[TIGR00484] translation elongation factor EF-G 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGACT TAAAATTTCA AAGAAACTTT GGTATTGCGG CGCACATTGA TGCCGGTAAA 
ACCACTACCA CAGAGCGTAT CCTGTACTAC ACAGGTAAAT CCCACAAAAT AGGGGAAGTG
CACGAAGGTG CTGCCACCAT GGACTGGATG GCACAGGAGC AGGAGAGAGG TATTACCATC
ACATCTGCTG CTACTACATG TTTCTGGAAA TTCCCGACTA CACAGGGAAA GCTTCAGCCA
GACACTAAAG AATACAAATT CAACATCATC GACACTCCGG GTCACGTGGA CTTTACCGTT
GAGGTAGAGC GTTCCCTGCG TGTACTGGAT GGTCTGGTAG CACTGTTCTG CGCTGTATCT
GGTGTAGAAC CACAGTCTGA AACCGTTTGG CGCCAGGCTA ACCGTTACCG TGTACCTCGT
ATCGGTTTCG TTAACAAAAT GGACCGTGCG GGTGCTGACT TCCTGAACGT GGTAAAACAG
GTGAAGGAAA TGCTGGGTGC TAACCCTGTT CCGTTGATGC TCCCTATCGG TGCTGAAGAT
ACTTTCAAAG GTGTGGTTGA CCTGATCACC ATGAAAGGTA TCATCTGGGA CGAAGAAGGT
AAAGGTGCTA CTTACCAGGA AATCGAAATT CCTGCTGACA TGAAAGATGA AGCAGAAGAA
TGGAGAGGTA AACTGGTAGA GGCAGTTGCT GAGTACGACG ACACCCTGAT GGAGAAATTC
TTCGAAGATC CAAATTCAAT CTCTGAAGCT GAGATCCACG AAGCTATCCG TAAGGCTACT
ATCGATATCG CTATCATCCC GATGCTGTGT GGTTCTTCCT TCAAGAACAA AGGTGTTCAG
AAGATGCTGG ATGCGGTTTG CCGTTACCTG CCTTCTCCAC TGGATATCGA AGCAGTAAAA
GGTACTAATC CTGACACTGG CGCTGAGATC GAGCGTAAAC CAGATGCAAA AGAACCATTC
TCTGCACTGG CGTTCAAGAT CATGACCGAT CCTTTCGTAG GTCGTCTGGC GTTCTTCCGG
GCTTATTCCG GTCACCTGGA TGCAGGTTCT TATGTACTGA ACACCCGTAC TGGTAAGAAC
GAGCGTATCA GCCGTATCAT GCAGATGCAC GCCAACAAGC AGAACCCGAT CGATTTCATC
GAAGCTGGTG ATATCGGTGC TGCTGTAGGT TTTAAAGATA TCAAAACAGG TGATACCCTG
TGTAACGAAG ATCATCCGAT CGTTCTGGAA TCTATGACAT TCCCTGAGCC TGTAATCCAC
ATCGCTATCG AGCCAAAAAC TCAGGCGGAC ATGGATAAAA TGGGTCTGGC GATCGCGAAA
CTGGTAGAGG AAGATCCTAC CCTGAAAGCA AAAACTGACG AAGAAACCGG CCAGACTGTA
TTGAGCGGTA TGGGTGAGCT TCACCTGGAA ATCATCGTTG ACCGTATGCG TCGCGAATTC
AAGGTAGAAG TTAACCAGGG TGCGCCTCAG GTTGCGTTCA AAGAAGCACT GACTGGCGTT
GTTACACACC GTGAAGTGTA CAAGAAACAG ACGGGTGGTC GTGGTAAATT CGCTGACATC
CAGATCGAGA TCGGACCTGC TGATCCGGAA TGGCTGAAAG AGAACGACGG TAAAACGTTC
CAGTTCATCA ACGATATCTT CGGTGGTTCC ATTCCAAAAG AATTCGTTCC TCCGGTACAG
AAAGGTTTCG AATCTGCAAT GAACCAGGGT GTTCTGGCAG GCTTCCCGCT GGATAACCTG
AAAGTTCGTC TGTTCGACGG TTCCTTCCAC CAGGTGGATT CCGATGCAGT ATCATTCGAG
CTTTGTGCAA GAGCAGCTTT CCGTGAGGCT GGCCGTAAGG CGAAACCAGT TCTGCTGGAG
CCAATCATGA AGGTTGAAGT ACAGACTCCT GACCAGTACA TGGGTGACGT AACAGGTGAC
CTGAACCGTC GTCGTGGTAT GCTGGAAGGT ATGGAAATGA GAAATGGTGT ACAGGTAATC
AAAGCTAAAG TTCCACTGAA AGAAATGTTC GGCTACGTAA CTCAGCTGCG TTCCATGTCA
TCAGGTCGTG CGACTTCCAT CATGGAGTTC TCTCATTACT CAGCAGCTCC AAACAGCATC
GCTGAAGAGG AAATTGCAAA AACAAAAGGT AAAGTGAACG CTGACTAA
 
Protein sequence
MADLKFQRNF GIAAHIDAGK TTTTERILYY TGKSHKIGEV HEGAATMDWM AQEQERGITI 
TSAATTCFWK FPTTQGKLQP DTKEYKFNII DTPGHVDFTV EVERSLRVLD GLVALFCAVS
GVEPQSETVW RQANRYRVPR IGFVNKMDRA GADFLNVVKQ VKEMLGANPV PLMLPIGAED
TFKGVVDLIT MKGIIWDEEG KGATYQEIEI PADMKDEAEE WRGKLVEAVA EYDDTLMEKF
FEDPNSISEA EIHEAIRKAT IDIAIIPMLC GSSFKNKGVQ KMLDAVCRYL PSPLDIEAVK
GTNPDTGAEI ERKPDAKEPF SALAFKIMTD PFVGRLAFFR AYSGHLDAGS YVLNTRTGKN
ERISRIMQMH ANKQNPIDFI EAGDIGAAVG FKDIKTGDTL CNEDHPIVLE SMTFPEPVIH
IAIEPKTQAD MDKMGLAIAK LVEEDPTLKA KTDEETGQTV LSGMGELHLE IIVDRMRREF
KVEVNQGAPQ VAFKEALTGV VTHREVYKKQ TGGRGKFADI QIEIGPADPE WLKENDGKTF
QFINDIFGGS IPKEFVPPVQ KGFESAMNQG VLAGFPLDNL KVRLFDGSFH QVDSDAVSFE
LCARAAFREA GRKAKPVLLE PIMKVEVQTP DQYMGDVTGD LNRRRGMLEG MEMRNGVQVI
KAKVPLKEMF GYVTQLRSMS SGRATSIMEF SHYSAAPNSI AEEEIAKTKG KVNAD