| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_1599 |
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| Symbol | |
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| ID | 8357741 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 1943460 |
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| End bp | 1946048 |
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| Gene Length | 2589 bp |
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| Protein Length | 862 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 644963779 |
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| Product | MscS Mechanosensitive ion channel |
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| Protein accession | YP_003121296 |
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| Protein GI | 256420643 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3264] Small-conductance mechanosensitive channel |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCCTCC ATATCTTTCT GATCGCCCTT CTTGTCAGTG CAAACCTCTT CGCACAAAAT
CAAAACCAAA CGGCTCCACC CAAGCCTATT GACAGCGCGA CACTCAGCAA AATCATTTCC
CAACAGGTAA AAGATACTTC CGGCAAATCG GTTATCCGGT TATCAGATAC TTCTGTAGCA
ATCATTATTA CACGGCTGGA AACCTATACC CTGATGCTCA ATCAGGTGAT GAGTACCCTA
AGACGCGGAC TTGATACAGC GGAGATCAGT GAAAGTATTC CGCTGATCGA TTCGTCTATA
AAGGTGGTAC AAAAAGACAT GACCGCTATC GGCAGTACTA ACAATGTACA TGACCTTTAT
ACAAACCGTG TATTGCTGGT CCAGCTGGAA AGAAAACTGG ACAGCTGGCA GGATGTGCTG
TTTAAGTTTC ACGACAGACT CGTAAATATC ACCGATACGC TGCAGTTACT GAGAAAAGAT
ACCAGTATGC GTAATATCCC CGCTGAAGAC GAACTACGGG GTATTTACGT CGGACAAATG
GCATCACTCA TCCAGAAATG GCGGCAGGTA GACAGTGCCA ATAAGACGAA TCTGTTGCAT
CTGGGATTGT TGCAGAACAG GGTCGCCAAG CGTTATATTG ATGTGACCAA TCTGCTGGAG
GATATGGATT ATCAGCTGAC TCGCTTCAGT CAGCGTATGT TTAATAAAGA CTTCAGTTAT
CTGTGGGAGC CGCCCCTGCC AGGTAAAAAA GGACCAAAAT TCCCGGAAGT ACTGCATCGC
TCTGTTCGCA AAAACCTTAA CATTCTCAAG ATATTCTTTG CTGTCAGCGG ACCTGTTTAC
CTGATCTGGC TACTGGGTGC AGCGCTATTC TTATGGTGGG TAAAATTTAA CGCCCGGAAA
ATTAAACGCA AACATGAAGA ACGGGAAGCA GAAACCATCC TGCAACATTC CCGTTACCTA
TACCGTTACC CTATCGCCAG TACGATACTG CTTGCTTCCA CCCTTTCGTT TCTGATTTCT
ATCCAATACC CGATATTCTA TTCCGGCATC TGCTGGATGA TTACAGCTAT TGCCACAACA
ATTATTATTC GCAATAGCAT TCCTCTCAAT TTATTAAAGC GATGGTATTT GCTGGTATTC
CTCCTGGCTT TGTACTGTGT CAATAACCTG TTGATACAGG TGACATTTTT TGAGCAATGG
GGCATCTTCA TCGGTGGGAT ATTGGCCATT ATTCTTGGCG TCTATCTCTT ACGTACGCTG
CGGAATACCA CATTGCCTTT GCCTAAATAC TCACGTTCTG CTATCTGGAC ATTTATCATA
TTAAGCGGTC TTTCCGTCAT ACTTGTGTTA ATGGCGAGGG TAGCTGCCGC CAAGATCATG
GGGGCTGCAA GTGTGGTCAG TATTACGATG GCGCTGGGTA TTGTGTTGAT GGTAGAAATA
CTGATGGAAG CGATCTATAT ACAGGTGGAA GCCAAAAAGG ATTCCAGCAC CTTCATTTCC
ATGATCGACT ATCAGAATAT CAAATCCCGT TTAAAGACAA TCTTCTATAT CGCTGCTTCT
ATCGGCTGGC TGGCACTGCT AGCCCGTAAT CTTTACATGT ACGACGGACT ATCTGAGATG
ATCAGTAACC TGCTGGTGGC CGAAAGAAAG ATTGGCAACT TTACATTCTC TTTCAGCAGT
GTGATCATCT TCCTGCTGAT CATCTGGCTG TCTACTGTTG TGACACAGAT TCTCTCTTAT
CTGTTGGGTT ATACCGGTCA GTCTTCGCAA CCACAGAAAA AACTGGGATC AGCGATGCTG
TTGATACGCC TGGCGGTACT CGCAGCAGGC ACCTTGCTGG CATTTGCGGC CTCGGGGATA
CCGATGGATA AACTCGCCAT TGTAATAGGT GCGCTGGGTG TAGGTATTGG TTTCGGTTTG
CAGAACATTG TGAATAACCT GGTATCGGGT ATCATCCTGG CATTTGAAAA ACCGATAGAG
GTGGGCGATG TGATAGAGTT AGGCAGCAGG TCAGGCGTAG TAAAGGAAAT TGGGATCCGT
TCCAGTAAAA TTTCTGCCGG AGACGGATCG GAGGTGATCG TACCCAACGG CGACCTGATT
GCACAACAAC TGGTAAACTG GACACTAACC AGCAGAACAC GTCGTGTAGA CGTAGTAGTA
GGCGTCGCTT ATGGTAGTGA CCTGAAGAAG GCGCTGACCG TTATTAAAGA ATACCTGGTG
AACCAGGAGG ATATTCTGAA AACACCGGAT CCGACGGTGT TATTGCAGAA CTTCCGGGAT
ACGGGTGTAG ATATACAGGC GATGTTCTGG ATCAGTGATC TTGGGCAGGC AGGTGTGACG
AAAAGTGAAG TGCTCACGGA TATCTATATC AAATTACAGG AAGCGGGTAT CAGTATCGCC
TATCCGAGAC CGCAGCAATT CCAGTTTAAT ATGGAGCCAG GTATCTGGAA ACAGCAACCG
GCACCGACAC CAGCTACACC TTCTGCACCA ATAGCAGCGG TGACGCCGAC ACCTGCGGGA
ACTCCGCCGG GAACTGGTGG TAACGGAGAA AGACCTGCTG CACCGGAAAA CCCCGCTCCT
AATCCATAG
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| Protein sequence | MRLHIFLIAL LVSANLFAQN QNQTAPPKPI DSATLSKIIS QQVKDTSGKS VIRLSDTSVA
IIITRLETYT LMLNQVMSTL RRGLDTAEIS ESIPLIDSSI KVVQKDMTAI GSTNNVHDLY
TNRVLLVQLE RKLDSWQDVL FKFHDRLVNI TDTLQLLRKD TSMRNIPAED ELRGIYVGQM
ASLIQKWRQV DSANKTNLLH LGLLQNRVAK RYIDVTNLLE DMDYQLTRFS QRMFNKDFSY
LWEPPLPGKK GPKFPEVLHR SVRKNLNILK IFFAVSGPVY LIWLLGAALF LWWVKFNARK
IKRKHEEREA ETILQHSRYL YRYPIASTIL LASTLSFLIS IQYPIFYSGI CWMITAIATT
IIIRNSIPLN LLKRWYLLVF LLALYCVNNL LIQVTFFEQW GIFIGGILAI ILGVYLLRTL
RNTTLPLPKY SRSAIWTFII LSGLSVILVL MARVAAAKIM GAASVVSITM ALGIVLMVEI
LMEAIYIQVE AKKDSSTFIS MIDYQNIKSR LKTIFYIAAS IGWLALLARN LYMYDGLSEM
ISNLLVAERK IGNFTFSFSS VIIFLLIIWL STVVTQILSY LLGYTGQSSQ PQKKLGSAML
LIRLAVLAAG TLLAFAASGI PMDKLAIVIG ALGVGIGFGL QNIVNNLVSG IILAFEKPIE
VGDVIELGSR SGVVKEIGIR SSKISAGDGS EVIVPNGDLI AQQLVNWTLT SRTRRVDVVV
GVAYGSDLKK ALTVIKEYLV NQEDILKTPD PTVLLQNFRD TGVDIQAMFW ISDLGQAGVT
KSEVLTDIYI KLQEAGISIA YPRPQQFQFN MEPGIWKQQP APTPATPSAP IAAVTPTPAG
TPPGTGGNGE RPAAPENPAP NP
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