| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_1536 |
|---|
| Symbol | |
|---|
| ID | 8357677 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chitinophaga pinensis DSM 2588 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013132 |
|---|
| Strand | + |
|---|
| Start bp | 1880811 |
|---|
| End bp | 1881422 |
|---|
| Gene Length | 612 bp |
|---|
| Protein Length | 203 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 644963716 |
|---|
| Product | fumarylacetoacetate (FAA) hydrolase |
|---|
| Protein accession | YP_003121234 |
|---|
| Protein GI | 256420581 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG0179] 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 52 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAATAA TTTGTGTTGG AAGAAATTAT GCTGATCATG CAAAGGAACT GAAAAATGAG
GTGCCAACCG AACCAGTGAT TTTCATGAAG CCTAAGAATG CATTATTACA GAATAATCAC
CCATTTTACT ATCCGGAGTT CACTGACAAT CTGCATTATG AATGCGAGCT GGTACTCCGT
ATCAGTAAGA ATGGTAAACA TATACAGGAG AAATTCGCCG ATAAATATTA CGATCAGATA
GGTATCGGAA TCGACTTCAC TGCCCGTGAT CTGCAGGAGA AACAGAAACA GAAAGGATTA
CCCTGGGAGA TTGCCAAGGC CTTTGACAAT TCAGCCGTAG TAGGACAGTT CATGCCTATT
ACCCCTGAAC TGGACAAAAA GGATATCAAT TTCTGTCTGT ATAAAAACAA GGAGATCGTA
CAACAGGGGA ATACCAAAGA CCTGCTGTTT TCCTTTGATT TCCTGGTGTC TTACATTTCC
AGGTATTTCA CCCTGAATAT CGGTGATCTG GTATTCACCG GTACACCGGC AGGCGTTGGT
CCGGTAGAAA TAGGCGATTC ACTGGAAGCA TTCATTGAGA ATGACAGTAT GCTGGAGTTT
ATGATTAAAT AG
|
|---|
| Protein sequence | MKIICVGRNY ADHAKELKNE VPTEPVIFMK PKNALLQNNH PFYYPEFTDN LHYECELVLR
ISKNGKHIQE KFADKYYDQI GIGIDFTARD LQEKQKQKGL PWEIAKAFDN SAVVGQFMPI
TPELDKKDIN FCLYKNKEIV QQGNTKDLLF SFDFLVSYIS RYFTLNIGDL VFTGTPAGVG
PVEIGDSLEA FIENDSMLEF MIK
|
|---|
| |