| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_1530 |
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| Symbol | ispD |
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| ID | 8357671 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 1875774 |
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| End bp | 1876454 |
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| Gene Length | 681 bp |
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| Protein Length | 226 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 644963710 |
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| Product | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase |
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| Protein accession | YP_003121228 |
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| Protein GI | 256420575 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1211] 4-diphosphocytidyl-2-methyl-D-erithritol synthase |
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| TIGRFAM ID | [TIGR00453] 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGAACAGC GTAAAAAGAT AGCGATCATT GTAGCCGGCG GATCAGGCAC ACGTATGGGA
AGTGCCGTCC CCAAGCAATT TCTGGAACTT TCAGGTAAGC CTGTATTATG GCATACGGTG
AATGCATTTG CAAGCGCATT CCCTGATATA CATATTGTGC TGGTATTGCC GGAAGTGCAT
TTTGACTACG TGAAACCATG GCTGCATGAT TTTAATACCC GCGCTGCCGT TACATTGGTG
AAAGGAGGAG AGACCCGCTT TCATTCAGTA AAGAATGGCC TGAATGAAGT ACAAAACCCG
GCTGTTGTGT TTGTACACGA CGGTGTTCGT CCGCTGATCA GCACAGCGCT GATCCGTTCC
TGCTATGAAG CGGCCCTGGA AAAGGGAAGC GCTATTCCGG TGATTGATAT GAAAGACAGT
ATCAGGCAGC TGGAAGGAGA GGGGAATAAG GCGGTGGACC GTGAGCAGTT CAAGATTATA
CAAACCCCGC AAACATTCCT CTCAGAGTGG CTATTGCCAG CCTTTTCATT ACCTTATGAT
CCCTTGTTTA CCGATGAGGC AACCGTTGTA GAACGGCAGG GGCACCGTGT ACACCTGGTA
CCGGGAGAGG AGGCGAATAT AAAAATAACG CGCCCGCTGG ATCTGACCAT TGCGAGCGCG
CTATTAAAGG AAAGAAATTA A
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| Protein sequence | MEQRKKIAII VAGGSGTRMG SAVPKQFLEL SGKPVLWHTV NAFASAFPDI HIVLVLPEVH
FDYVKPWLHD FNTRAAVTLV KGGETRFHSV KNGLNEVQNP AVVFVHDGVR PLISTALIRS
CYEAALEKGS AIPVIDMKDS IRQLEGEGNK AVDREQFKII QTPQTFLSEW LLPAFSLPYD
PLFTDEATVV ERQGHRVHLV PGEEANIKIT RPLDLTIASA LLKERN
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