| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_1529 |
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| Symbol | |
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| ID | 8357670 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 1874652 |
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| End bp | 1875701 |
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| Gene Length | 1050 bp |
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| Protein Length | 349 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 644963709 |
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| Product | S-adenosylmethionine/tRNA-ribosyltransferase- iso merase |
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| Protein accession | YP_003121227 |
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| Protein GI | 256420574 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0809] S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine synthetase) |
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| TIGRFAM ID | [TIGR00113] S-adenosylmethionine:tRNA ribosyltransferase-isomerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACTAT CACAGTTTAG ATTCGATCTT CCTTTAAATC TGATTGCGCA GCACCCTTCC
AAGACTAGAG ATGAAGCACG TTTGATGGTG GTAAACCGTG CCACCGGTAA AATCGAGCAC
AAGGTGTTCC GTGATATCAT CAACTACTTC AATGATAAGG ATGTAATGGT GGTGAACAAC
ACCAAGGTAT TCCCTGCTCG TCTGTATGGC CGTAAGGAGA AGACTGGTGC AAAGATTGAA
GTATTCCTGC TCCGTGAGCT GAACAAGCAG AACCGCTTGT GGGATGTAAT CGTAGATCCT
GCCCGTAAGA TCAGGGTGGG TAACAAATTA TACTTTGGCG ATGATGAATC GCTGGTAGCA
GAAGTGATTG ATAACACCAC ATCCCGTGGC CGTACGATCC GCTTCCTGTT CGAAGGTGAT
GACAATGAAT TTAAGCAGGT ACTGGACACC CTGGGTGAAA CACCGCTGCC TAAATACATC
AAGCGTAAGC CTGAAGAAGA GGATAAAGAG CGTTATCAGA CAGTTTACGC AAAACATGAA
GGCGCCGTTG CAGCTCCGAC TGCTGGTCTG CACTTCAGCC GTGAGCTGAT CAAACGCCTG
GAGATCAAAG GTGTTAAATT CGCAGAAGTT ACCCTGCACA CCGGTTTAGG CACATTCCGT
CCTATCGAGG TAGAAGATCT GAGCAAACAC AAGATGGATG CTGAGTACTT CAACATTGAC
GAGTATGCTG TGAAAGTGGT GAACAAGGCA AAAGAAGAGA ACCGCAAGGT TTGTGCGATC
GGTACTACCA CCGTGAGAGC GGTTGAGTCT TCCGTGACTG CACAGAACCT GCTGAAAGCA
GCAGAAGGAT GGACAAATAC CTTTATTCAC CCTCCTTATG ATTTCGCTAT TCCGAATGCA
CTGGTTACTA ACTTCCACCT ACCTAAAACA AGCCTCCTGA TCATGGTATG TGCTTTTGCA
GGTTATGATC TGGTGATGGA AGCATATCAG CAGGCTATTA AGGAGAAATA CCGTTTCTTC
AGCTATGGTG ATGCAATGCT GATCATCTGA
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| Protein sequence | MKLSQFRFDL PLNLIAQHPS KTRDEARLMV VNRATGKIEH KVFRDIINYF NDKDVMVVNN
TKVFPARLYG RKEKTGAKIE VFLLRELNKQ NRLWDVIVDP ARKIRVGNKL YFGDDESLVA
EVIDNTTSRG RTIRFLFEGD DNEFKQVLDT LGETPLPKYI KRKPEEEDKE RYQTVYAKHE
GAVAAPTAGL HFSRELIKRL EIKGVKFAEV TLHTGLGTFR PIEVEDLSKH KMDAEYFNID
EYAVKVVNKA KEENRKVCAI GTTTVRAVES SVTAQNLLKA AEGWTNTFIH PPYDFAIPNA
LVTNFHLPKT SLLIMVCAFA GYDLVMEAYQ QAIKEKYRFF SYGDAMLII
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