Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_1476 |
Symbol | |
ID | 8357617 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 1810999 |
End bp | 1811685 |
Gene Length | 687 bp |
Protein Length | 228 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 644963656 |
Product | Urease accessory protein UreF |
Protein accession | YP_003121174 |
Protein GI | 256420521 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0830] Urease accessory protein UreF |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0566307 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 0.716543 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCACACCT GGTTACCATA CCTCTTACAT TTAAGCGATC CTACTTTGCC GATAGGGGCG TATACGCATT CCGGCGGACT GGAAACCTAT GTGCAGCAGG GCCTTATCAA AGATGGTCCG GGAGCAGCAG CTTTTATCCG AAATATGCTT GCACACAATC TGCCTTACAA CGATGCATTG TTTGCCGTAC TGGCTTACCG GGCTGCCCTG GAAGGAGATA TCACCAGCAT TGTAGCACTG GACCAGGAAT GTACTGCATT AAAAGCACCA CAGGAGTTGC GGATGGCCAG TCAGAAACTG GGGATGCGGT TATTGAAATT GCTGTCGCCA CTGGTGGTAC ATGCTACCGG TGAAAGTTAC AGGGAGCAGA TAAAATCAGG CGCAGCACTG GGACATTATT GCCTGGTTTT CGGTGTATAT GCCGCTTTAT CCGGTATTCC GCTGGAAGAG GCTTTGACGG CCTTTTATTA CAATGCTGCC ACCGGTATGG TCACTAACAG TGTAAAGCTG ATTCCGCTGG GTCAGCAGCA GGGGCAACAG ATCCTTTTTG AACTGCTGCC ACAGTTACCG GAGCTGGTGG CGCGTACCCT GGAAATACCC CGTGATATGG CAGGACGTTG CAGCTTTGGA TTTGATATCA GAAGTATGCA GCATGAACGG CTGTATTCGA GATTGTATAT GTCTTAA
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Protein sequence | MHTWLPYLLH LSDPTLPIGA YTHSGGLETY VQQGLIKDGP GAAAFIRNML AHNLPYNDAL FAVLAYRAAL EGDITSIVAL DQECTALKAP QELRMASQKL GMRLLKLLSP LVVHATGESY REQIKSGAAL GHYCLVFGVY AALSGIPLEE ALTAFYYNAA TGMVTNSVKL IPLGQQQGQQ ILFELLPQLP ELVARTLEIP RDMAGRCSFG FDIRSMQHER LYSRLYMS
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