Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_1468 |
Symbol | |
ID | 8357609 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | - |
Start bp | 1800044 |
End bp | 1802092 |
Gene Length | 2049 bp |
Protein Length | 682 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 644963648 |
Product | TonB-dependent receptor |
Protein accession | YP_003121166 |
Protein GI | 256420513 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAAAC TGCTTCTGGC GCTTGGCATA TTCCCGCTGG CCACGTACGC ACAATCATAT TCTGATACTA CGCATCGCCT GCGCGAAGTA GTGATTCAGG CATATCCTGG TAAACAGTTT ACCCTGCTCC AGGTACCTAC CAGCAGTACC GTACTGACCT CCCGGCAGCT GGCATTACAA CAGGGCGTTA CCCTGCTGCC TGCCATGAAT ACTGTTCCCG GCGTACGTAT GGAAGAACGT TCTCCCGGCA GTTACCGCCT CTCTCTAAGA GGAAGCCTGT TGCGCTCTCC TTTTGGGATC CGCAATGTAA AGATCTACCT GGATGAAATT CCCCTGACAG ATGCTGGTGG TAATTCTTAC CTGAACCTCT CCGATCCGGG CAGCTTCCAG GGCATTGAAG TGTTAAAGGG ACCTGACGGC AGCCAGTTTG GCGCTAACTC GGGTGGTGTG ATACTCCTGC ATCCTGCGGG TACCCTACCT GACAGCAGCC GCTTACGTGC TGATATACAG GGGGGCAGTT ATGGCCTGTT CCGCGAACAG GTAGGCTGGC AGCAGCAATG GGGTAATTAT AAACTGAATG TTTATCAGGC TGTACACCGT TCCGACGGCT ATCGCGATAA CAGCGCCATG CAGCGGTATT ATATACAAAC CGCCCAGCAA TGGCAATACA ACGCACATAA TCAACTGAAA CTGATTGCGT TTTACAGCGA CCTGGATTAT CGTACCCCAG GCGGACTGAC AGAAGCACAG ATGAACGCCA ATCCGAAGGC TGCCCGTCCT GCGACGCCAG CCTTACCTGG CGCTATTACC CAGAAAGCCG GTATCCGTAA TAAGACCGCT TTCGGTGGAT TGGTACATAC CTCCCAGCTT GCTGAACACT GGCAACATGT TATTTCCGTG TATGGTAGCA ATACACATTT CGAGAATCCC TTCATCACCA ATTATGAAGC AAGGGATGAG AATACCGCCG GTGCACGTAC TTATATCGCT TTACAAGATC AGCCACTGGG CAACAGCGGG ATGCGTCTCG ACTGGACCAC AGGTCTGGAA TGGCAACAAA CCACTTCAGA TATCGACAAC TATGGCAACC GCGCAGGTGT AAGAGATACC CTGCAAGCTG CCAGCGATAT CACTGCCAGA CAATACTTCT ACTTTACCGG TCTGACCCTG CGTCCCGGCA AACAATGGGT GGCAGAAGCG GCTGTCAGTG TAAACTACTA TCGTTATCAC TTTAACGATG TAGCAGCTGG CGTAGATGGT AAGAAGAAAT TCACGGCGGA ACTGATGCCC CGTTTCTCCC TGTCTTACCT GATCACACCA GCGCTGGCTG CACGGGCGAC AGTAAGCAGG GGCTACTCCC CTCCTTCTAT TGCGGAGGTA AGGGCTTCCG ATAATATCAT TAATACGGGT CTTCAGGCGG AAACTGGCTG GAACTACGAA ACAGGCCTTC GCCTGAACTC CCGTAATAAC CGTTTCATGG CAGATGCAGC AGTCTTCTAC TACAAATTAC AGGATGCAAT CGTACGTAAG CTCCATGATA ATGGCACAGA GTTCTTCACC AATGCAGGTG GTACCAACCA GACAGGTGTA GAATTCCAGG GAAGTGCATG GTTACTGATG CCTCGTCGCG AAGGCTTCCT CCGTGGCATA CAGTTACAGG AAAGTTTTAC TTACAGCCAC TTCCGCTTCA GCAACTATAA CAGCGCCGGT AAGGACTTCT CCGGTAATGC CCTCACCGGT GTACCGAAAA CAGTCGTAAC AGGCAGTTTG CTGATAGAAC TGCCTGCCAG GGTTTCCCTG TATGGTCAAT ATAACTTCGT TGACCGCTTA CCGCTGGATG ACGCCAATAC TGCTTTTTCA AAGGAATATC ACCTGGTACA GGCAAAGGTG AACTGGGAAG TGAATAAATG GCTGGCAGTA TATGCCGGTG CGGACAACCT GCTGAACCAG CGTTATAACC TGGGGAATGA CCTGAATGCA GTAGGTGCAC GCTATTACAA CCCTGCTCCT GACAGAAACT ATTATGGCGG TGTAAGGGTG ACCTTATAA
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Protein sequence | MKKLLLALGI FPLATYAQSY SDTTHRLREV VIQAYPGKQF TLLQVPTSST VLTSRQLALQ QGVTLLPAMN TVPGVRMEER SPGSYRLSLR GSLLRSPFGI RNVKIYLDEI PLTDAGGNSY LNLSDPGSFQ GIEVLKGPDG SQFGANSGGV ILLHPAGTLP DSSRLRADIQ GGSYGLFREQ VGWQQQWGNY KLNVYQAVHR SDGYRDNSAM QRYYIQTAQQ WQYNAHNQLK LIAFYSDLDY RTPGGLTEAQ MNANPKAARP ATPALPGAIT QKAGIRNKTA FGGLVHTSQL AEHWQHVISV YGSNTHFENP FITNYEARDE NTAGARTYIA LQDQPLGNSG MRLDWTTGLE WQQTTSDIDN YGNRAGVRDT LQAASDITAR QYFYFTGLTL RPGKQWVAEA AVSVNYYRYH FNDVAAGVDG KKKFTAELMP RFSLSYLITP ALAARATVSR GYSPPSIAEV RASDNIINTG LQAETGWNYE TGLRLNSRNN RFMADAAVFY YKLQDAIVRK LHDNGTEFFT NAGGTNQTGV EFQGSAWLLM PRREGFLRGI QLQESFTYSH FRFSNYNSAG KDFSGNALTG VPKTVVTGSL LIELPARVSL YGQYNFVDRL PLDDANTAFS KEYHLVQAKV NWEVNKWLAV YAGADNLLNQ RYNLGNDLNA VGARYYNPAP DRNYYGGVRV TL
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