Gene Cpin_1466 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_1466 
Symbol 
ID8357607 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp1797486 
End bp1798652 
Gene Length1167 bp 
Protein Length388 aa 
Translation table11 
GC content48% 
IMG OID644963646 
Productgalactokinase 
Protein accessionYP_003121164 
Protein GI256420511 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0153] Galactokinase 
TIGRFAM ID[TIGR00131] galactokinase 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGAGCAAG CAAAATTAAA TGCCTTTTCT CAACAGCACT TCGACCAGGA ACCTATTATG 
GTGAGGGCGG CAGGACGTAT TAACCTGATC GGAGAGCATA CCGACTATAA TAACGGGTTT
GTATTGCCCG CTGCTATAGA TAAAGCTATC TACCTGGCTA TTGTAAAACG CAATGACAAT
AAGATCGTAC TCCATGCGCT TGATGTAAAC GATCGTTATG AAGGCACACT GGACAACCTG
GTTCGCTCCC CGAAACAGTG GCCTGATTAC CTGTTAGGCG TTGTACAGCA GTTACAACAG
GCAGGTCATA TACTTGGTGG TTTCGAATGT GCTTTTTGCG GTAATGTTCC CCTGGGCGCC
GGCCTTTCAT CCTCCGCAGC AGTAGAATGC GCTACCATAT ATGCATTAAA TGAGCTTTTC
GGGCTGGGAA TCGGCCGTAA GGATATGACC TTGCTGGCAC AGGCTGCAGA GAATCACTTT
GTTGGGGTTC GTTGTGGTAT CATGGACCAG TTTGCGAGCA TGTTCGGTAA AAAACAACAG
CTGATCAAGC TGGATTGCGC TTCACTGGAT TACGAATATA TTCCTTTCAA CTTTGACGAT
GTCAGCCTGG TATTACTGGA TACCCAGGTG AAACACTCCC TGGCTTCTTC TGAATACAAT
ACCCGTCGTG AAGAATGTGA AGCAGGCGTG GCGCTGATCA AAAAGCACCA TCCGCATGTG
AACAGTCTGC GCGATGCGAA CATGGATATG CTGGATGCTT ATGTAAAAGG ACACAATGCA
ACTGTATACG ATCGCTGCCG CTACGTAGTG GAAGAGATCC AGCGTTTGCA GGATGCCTGT
GCTGACCTGC AGCGCAATGA CCTGGAAGCA TTTGGTAAAA AAGTATTTGC TACACACGAA
GGACTGGATA AGCTGTATAA TGTCAGCTGT CCGGAACTGA ACTGGCTGGC TGAATTTGCT
GCCGGTCAGC AGGGTGTACT CGGCGCCCGT ATGATGGGTG GCGGTTTTGG TGGTTGTACT
ATCAATATCG TGAGAAAATC TGCCGTACCA GCATTACTGG AAAAAGCAGC AGCCGGTTAC
GAACAGGCTT TCAAAACACC ATTGAAAGCA TATGTAACCA GCATCGAAGA TGGCTGCCGT
ACTGTGAATA ATCTTGTCAA TAACTAA
 
Protein sequence
MEQAKLNAFS QQHFDQEPIM VRAAGRINLI GEHTDYNNGF VLPAAIDKAI YLAIVKRNDN 
KIVLHALDVN DRYEGTLDNL VRSPKQWPDY LLGVVQQLQQ AGHILGGFEC AFCGNVPLGA
GLSSSAAVEC ATIYALNELF GLGIGRKDMT LLAQAAENHF VGVRCGIMDQ FASMFGKKQQ
LIKLDCASLD YEYIPFNFDD VSLVLLDTQV KHSLASSEYN TRREECEAGV ALIKKHHPHV
NSLRDANMDM LDAYVKGHNA TVYDRCRYVV EEIQRLQDAC ADLQRNDLEA FGKKVFATHE
GLDKLYNVSC PELNWLAEFA AGQQGVLGAR MMGGGFGGCT INIVRKSAVP ALLEKAAAGY
EQAFKTPLKA YVTSIEDGCR TVNNLVNN