| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_1409 |
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| Symbol | |
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| ID | 8357529 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 1679278 |
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| End bp | 1680498 |
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| Gene Length | 1221 bp |
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| Protein Length | 406 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 644963568 |
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| Product | diaminopimelate decarboxylase |
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| Protein accession | YP_003121107 |
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| Protein GI | 256420454 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0019] Diaminopimelate decarboxylase |
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| TIGRFAM ID | [TIGR01048] diaminopimelate decarboxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTAAGC AAAGCGATCT TCTCCCTGCC GAATACCTCG TAAAATTGGC TGAGGAATTT
GGAACTCCGG TATATATTTA TCATGCTGAA AAAATAAAGA TCCAGTACGA AAAGCTGCAA
ACGGCTTTCC AGAAGACGGA TGCTCGCTTT TTCTATGCCT GTAAAGCGCT TACCAATATC
AATATCCTGA AGTATATCAA CTCCCTGGGC TGTGGACTCG ACACCGTATC CATCCAGGAA
GTACATCTGG GTCTGAAAGC CGGTTTCGCT CCTAACAATA TCATCTTCAC CCCCAACTGC
GTGGACCTGG ATGAGATCAT TGCTGCGAAA GAACTGGGTG TTAATATCAA TATCGATAAT
ATTTCCATCC TGGAACAGTT CGGTAACCGC TTCGGCGATT CTTACCCGAT CTGTATCCGC
CTGAACCCGC ATATCATGGC AGGTGGAAAC TATAAAATAT CTACCGGTCA CGTTGACAGC
AAGTTCGGTA TCTCTATTCA CCAGCTACGT CACATCGAAC GTATCGTAAA AAGTACCAAA
CTGAAAGTAA CCGGTCTGCA CATGCACACA GGTTCCGAGA TCAAAGACGT AGACGTATTC
CTGCGTGGGG TAGAAATCAT GTTCGAACAG GCCGTACACT TCCCTGACCT GGAATTCATC
GATCTGGGCA GCGGTTTCAA AGTAGCTTAC CAGGCCGGCG ATCCGGAAAC TGATATCAAC
CTGCTGGGTA GAAAACTGTC CGAGGCATTT AATAAGTTCG CCGCTACCTA TAAACGTCCT
TTACAGGTAT GGTTTGAACC AGGTAAGTTC CTGGTAAGCC AGAGCGGTTA CTTTGTTGTA
AAGGCCAATG TGATCAAACA GACTACCGCA ACCGTATTCG TAGGGGTGAA CTCAGGCTTT
AACCACCTGA TCAGACCTAT GTTCTACGAC GCATTCCACC TCATTAAAAA CATCTCTAAT
CCGAAAGGAA CCGAACGGAT CTATACGATT GTAGGTAATA TCTGCGAAAC AGATACCTTC
GGTTGGGACC GTAAGCTGAA TGAAGTGAAA GAAGGAGATT TCCTGGTCTT CTACAATGCC
GGCGCCTATG GTTTCGAAAT GTCCTCCAAC TTTAACTCCC GCCTGAAACC TGCCGAAGTG
CTGGTAAAAG ACGGTAAAGC ACAGCTTATC CGTAAGCGGG ATACCCTCGA AGATCTGCTA
CGCAATCAGA TCGAGTTATA G
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| Protein sequence | MSKQSDLLPA EYLVKLAEEF GTPVYIYHAE KIKIQYEKLQ TAFQKTDARF FYACKALTNI
NILKYINSLG CGLDTVSIQE VHLGLKAGFA PNNIIFTPNC VDLDEIIAAK ELGVNINIDN
ISILEQFGNR FGDSYPICIR LNPHIMAGGN YKISTGHVDS KFGISIHQLR HIERIVKSTK
LKVTGLHMHT GSEIKDVDVF LRGVEIMFEQ AVHFPDLEFI DLGSGFKVAY QAGDPETDIN
LLGRKLSEAF NKFAATYKRP LQVWFEPGKF LVSQSGYFVV KANVIKQTTA TVFVGVNSGF
NHLIRPMFYD AFHLIKNISN PKGTERIYTI VGNICETDTF GWDRKLNEVK EGDFLVFYNA
GAYGFEMSSN FNSRLKPAEV LVKDGKAQLI RKRDTLEDLL RNQIEL
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