| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_1341 |
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| Symbol | |
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| ID | 8357459 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 1599917 |
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| End bp | 1602055 |
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| Gene Length | 2139 bp |
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| Protein Length | 712 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 644963499 |
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| Product | DNA topoisomerase III |
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| Protein accession | YP_003121040 |
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| Protein GI | 256420387 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0550] Topoisomerase IA |
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| TIGRFAM ID | [TIGR01056] DNA topoisomerase III, bacteria and conjugative plasmid |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGGTTT GTATCGCTGA AAAACCAAGT GTAGCCAGAG ACATTGCCGA AGTCATTGGC
GCTAAAGAAC GTAAGGATGG ATATTACGAA GGCAACGGAT ACCAGGTAAC CTGGACCTTC
GGGCATTTCT GTACGCTGAA AGAGCCGCAT GATTATACGG AACAATGGAA GTTCTGGCGA
CTGGAAGATC TCCCCATGAT CCCCAGCAGT TTTGGCATTA AACTCATAGA CAACTCGGGC
GTTCAGAAGC AGTTCAAGAT CATCGAACAA CTGGTACAGC ATAGTGAAGA AGTGATCAAC
TGCGGGGATG CCGGCCAGGA AGGGGAGCTT ATCCAGCGAT GGGTATTGCT TAAAGCCCAA
TGCACCGCGC CTGTAAAAAG GCTGTGGATC TCTTCACTGA CAGAACAGGC GATCCGCGAA
GGATTTCAGA AACTCAAAGA CGCAGACCAA TATAATAACC TATATGCAGC GGGTAGTGCC
AGGGCGATCG GCGACTGGTT ACTGGGCATG AATGCCACCC GGCTGTTCAC CAAGAAATTT
GCCATGGGAA AGACTGTACT CTCCATCGGG AGGGTACAGA CTCCTACCCT GGCGATGATC
GTAGCCCGGC AGAAAGAGAT CAACGCCTTC GTTTCCGAGG AATACTGGGA GTTGAAAACA
GTATACCGGG AAGTGGAATT TACCGCTACC ATTGACCGTA TCAAGGTACT GGACCGGGCA
GAAAAAGGGC TGGCTTATCT GAAAGAGCAC CCATTCGAAG TCACTTCCTT TGAGAAAAAA
GAAGGGAAAG AGGGTAATCC CAAGCTGTTT GACCTCACCG CCTTACAGGT GGAAGCCAAT
AAGAAATACG CTTATTCTGC TGACGATACC CTGAAATATA TCCAGAACCT GTATGAAAAG
AAGCTGGTGA CCTACCCAAG GGTAGATACC ACTTACCTCT CCGAAGACCT GCATCCGAAA
ATTGCAGGTA TCATGCAGGA CCTGACGCCT TATGCGGCAT TGACAGCACC AATACTGGCC
AATCCGATTC CAAAGCTCAA GACTGTTTTC GATGATAAAA AGGTGACAGA TCACCATGCG
ATCATCCCTA CGGGTATCTA TCCGTCCAAT CTTGGTATGG AAGAGAAACG TATTTATGAC
CTCGTAGCCA GACGTTTCAT TGCAGCTTTC TATCCGGAGT GTAAAATATC CAATACGACC
ATATTGGGTA AAGTGGGTCA GGTGGAATTT AAAGTAACCG GTAAGCAGAT ACTGGAGCCA
GGCTGGAAGG AAGTATATGC CAATGATGTG ACGCCTAAAA AAGAAGGTGA AGAAGAGGAA
AAGATCCTGC CGGTTTTTGA GGTTGGCGAG AGTGGCCCAC ATACCCCCAG GATTCACCAG
GGTAGGACTA CGCCACCGAA AGCCTTCACA GAAGCCACTT TACTCCGTGC CATGGAAACA
GCGGGTAAAC AGGTCGATGA TGAAGAAATG CGTGAGTTAC TGAAAGATAA CGGTATCGGA
CGTCCATCTA CCCGTGCGAA TATTATCGAA ACCCTCTTCC GCCGGAAATA TATTGAGAAA
CGTAAGAAGA ATATCTTCGC TACACAAACG GGTATCGATC TCATTGATAC CATTCAAACA
GAACTGCTGA AAAGCCCTGA GCTGACAGGT ATCTGGGAAG GTAAACTGCG TCAGATAGAG
AAAGGCGAAT ATGCCATGGA GACCTTCAAA CAGGAGCTGA TCCAGATGGT AATTGACCTG
ACGATCGAAG TAAAGACCTC TAATTATAAA GTGATCACCG TGCGGCCGGA TCAACCGGAA
GAAAAAGAAA AGGAAAAAGA AGAGAAACCC AAAAAAGAGG CTAAACCGAA AGAGCCGAAG
AAAGCCGTCG TTATTGCGGA GCAACAATGC CCGAAATGCA AGGCACACCC ACTGAAGAAA
GGGAATACCG CTTATGGCTG TGCAAACTTC AACGTATGCG GCTTTAAAGT GCCATTTGAA
GTCTTTGGCA AGAAACTCAC TGACAAACAG ATTGCCGATC TGCTGGCTAA AGGAAAGACC
GGTAAGATCA AAGGCTGGAA ACTGCCAGGT GCTGCAGGTG ATACGGAAGG TAAACTGATC
CTGAATAAAG GATTTGAGCT GGAAGTAGAG AAAGCCTGA
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| Protein sequence | MKVCIAEKPS VARDIAEVIG AKERKDGYYE GNGYQVTWTF GHFCTLKEPH DYTEQWKFWR
LEDLPMIPSS FGIKLIDNSG VQKQFKIIEQ LVQHSEEVIN CGDAGQEGEL IQRWVLLKAQ
CTAPVKRLWI SSLTEQAIRE GFQKLKDADQ YNNLYAAGSA RAIGDWLLGM NATRLFTKKF
AMGKTVLSIG RVQTPTLAMI VARQKEINAF VSEEYWELKT VYREVEFTAT IDRIKVLDRA
EKGLAYLKEH PFEVTSFEKK EGKEGNPKLF DLTALQVEAN KKYAYSADDT LKYIQNLYEK
KLVTYPRVDT TYLSEDLHPK IAGIMQDLTP YAALTAPILA NPIPKLKTVF DDKKVTDHHA
IIPTGIYPSN LGMEEKRIYD LVARRFIAAF YPECKISNTT ILGKVGQVEF KVTGKQILEP
GWKEVYANDV TPKKEGEEEE KILPVFEVGE SGPHTPRIHQ GRTTPPKAFT EATLLRAMET
AGKQVDDEEM RELLKDNGIG RPSTRANIIE TLFRRKYIEK RKKNIFATQT GIDLIDTIQT
ELLKSPELTG IWEGKLRQIE KGEYAMETFK QELIQMVIDL TIEVKTSNYK VITVRPDQPE
EKEKEKEEKP KKEAKPKEPK KAVVIAEQQC PKCKAHPLKK GNTAYGCANF NVCGFKVPFE
VFGKKLTDKQ IADLLAKGKT GKIKGWKLPG AAGDTEGKLI LNKGFELEVE KA
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