Gene Cpin_1335 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_1335 
Symbol 
ID8357453 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp1592138 
End bp1593586 
Gene Length1449 bp 
Protein Length482 aa 
Translation table11 
GC content46% 
IMG OID644963493 
Productsodium/hydrogen exchanger 
Protein accessionYP_003121034 
Protein GI256420381 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0475] Kef-type K+ transport systems, membrane components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATAAGA GACTGTTGCT TTATCCACTG ATTATCGGCT TTTTCGGATG TCTTATCTGG 
TTTATTATCA ATAAGGGCAG CCATCTTACA ACCGACGGCA GTACGCCTGT GAATAAGATG
GCCTCTGCTG CTTCCGCATC TGCACACACA ATTCCACCCA CTTCTACAGC GGAGAGTGTC
TGGAATTCAA TGGTCCAGAA TGTACATCAT CCTTTAGCGT TATTGCTGTT ACAGATAATT
CTGATTTTGG CCACTGCCCG ATTATTTGGC TGGCTGGCAA ATAAGATCGG ACAACCTTCA
GTAGTAGGAG AGATTGTAGC AGGTATTTGC CTGGGACCAT CCCTGCTTGG GATGGTATGG
CCTTCAGGAA GTACGTTTAT TTTTCCTGCG GAAGGTTTTA AAAATCTGCA GTTTTTAAGT
CAGATAGGTC TTGCTTTCTT CATGTTTGTA GTAGGTATGG AACTGGATAC GGAGAAGATG
AAGAACAAGG CGCATGATGC GGTGATGATC AGTCATGCGA GTATTGTATT TCCTTTCTTT
CTGGGTGTAA GCTTAGCTTA CTATATGTAT GCAAGATTTG CCCCTGCGAA TGTAAGTTTC
CTGTCTTTTG CACTGTTTAT GGGTATTGCC ATGAGCATCA CTGCATTCCC GGTTTTAGCG
CGTATTGTAC AGGAGAGAAA GCTGAGCAGT ACTCCACTGG GGCTGCTGGC TATTACCTGT
GCTGCGGCAG ATGATGTTAC TGCATGGTGC ATACTGGCGG TTGTTATTGC GATCGTAAAA
GCGGTTACAT TATGGACGGC TGTGCTTACG CTGGTATTAT CACTGATTTT CGTCGGATTC
ATGTTATATA TTCTAAAACC CTGGTTAGCC AAAAAAATCG CACGTTTCCA GGAGCAACAT
AAAGAGAAAT CCATTGTTGC CCTCGCATTT ATGACGCTGC TATTTTCAGC ATGGGCTGCA
GAGGTAATTG GCATACATGC CTTGTTTGGT GCTTTTCTGG CGGGCGTGAT CATGCCTTCA
GAAGTATCAG TACAGAAACT GCTGACTGAT AAACTGGAAG ATGTGAGCGT ATTGTTATTA
CTGCCTATCT TCTTTGTGTT TACCGGACTG CGTACACAGA TCGGCTTACT GGGCCAGGGT
AATCTTTGGG CGGTGTTTGG TCTGATCATG CTGGTAGCAG TAGGAGGTAA ACTGGGAGGT
AGTGCGCTGA CAGCTAAATT GATGGGACAG TCCTGGATGG ATTCTCTTGG TATAGGCGCC
CTGATGAACA CCAGAGGATT GATGGAGCTG GTCGTATTGA ATATCGGTTA CGACCTGGGT
ATTCTGTCAC CGGAAGTGTT TGCGATGTTG GTACTAATGG CGCTGGCAAC GACGTTTATG
ACGGGTCCGT TGCTGGATGT AGTGAAGAAA GTGGAAGAGA GCAAGTTACA GGCCAGCCAG
ATCGGCTAA
 
Protein sequence
MNKRLLLYPL IIGFFGCLIW FIINKGSHLT TDGSTPVNKM ASAASASAHT IPPTSTAESV 
WNSMVQNVHH PLALLLLQII LILATARLFG WLANKIGQPS VVGEIVAGIC LGPSLLGMVW
PSGSTFIFPA EGFKNLQFLS QIGLAFFMFV VGMELDTEKM KNKAHDAVMI SHASIVFPFF
LGVSLAYYMY ARFAPANVSF LSFALFMGIA MSITAFPVLA RIVQERKLSS TPLGLLAITC
AAADDVTAWC ILAVVIAIVK AVTLWTAVLT LVLSLIFVGF MLYILKPWLA KKIARFQEQH
KEKSIVALAF MTLLFSAWAA EVIGIHALFG AFLAGVIMPS EVSVQKLLTD KLEDVSVLLL
LPIFFVFTGL RTQIGLLGQG NLWAVFGLIM LVAVGGKLGG SALTAKLMGQ SWMDSLGIGA
LMNTRGLMEL VVLNIGYDLG ILSPEVFAML VLMALATTFM TGPLLDVVKK VEESKLQASQ
IG