Gene Cpin_1318 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_1318 
Symbol 
ID8357436 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp1575870 
End bp1576985 
Gene Length1116 bp 
Protein Length371 aa 
Translation table11 
GC content46% 
IMG OID644963476 
ProductUBA/THIF-type NAD/FAD binding protein 
Protein accessionYP_003121017 
Protein GI256420364 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1179] Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCAGGCA AAATGACAGA ACTAGAGCAT TATATCAATC AGCAACGGAC CGAGCCAGAT 
AATTACACAC CAGTATTTTA TCGATTGCAG CACGAAGAAC AATATGTCGA TTTACTGGCT
TTACTGGCAA AGAATCCGCA TATCCGGGTA TATGACGAAA TATACTCTCA GTTAAGGGAG
TTGATGAAGA TCCGCAATCC TACCAAACGA CTCACGGAGG AAGAATCTGA ACAAAAGATC
AGGGAATATG TTGGTACTAC ACCGCTCCAC GCTTTTGGCG TTTGGGTTTA TTACCCCTGG
TCACACCGTG TGGTACATAT TGTAGATGAG AAGGATTTTA TTGAACTCCG CACCAGCCGT
AACAGGGAAA AGATCACCGA AGAAGAGATA GCCCTGCTCA GCAGTAAGAA AATAGGCATT
ATCGGCCTTT CAGTAGGCCA ATCCATAGCG CTGACGCTTA CCATGGAACG GGTATGTGGT
GAATTGCGAC TGGCCGATTT TGATAAAGTT GAGCTGACGA ATATGAACAG GATCCGTACC
GGTATTCACA GCATACAGAC ATATAAGGTG GTGATCGCTG CACGCGAAAT CGCTGAACTG
GACCCATTCA TTAAGGTTGT CATTTATAAA GATGGCGCCA CTGAAGAAAA CCTGGACGAC
TTTTTCACCA AAGATGGGCA TCTCGACATC CTCGTAGAAG AGTGTGACGG TATCGATATA
AAGATATTGA GCAGGATGAA GGCCAAAGCC CTCGGTATCC CCGTAGTAAT GGATACAAAT
GACAGAGGCC TGGTTGACGT GGAACGTTTT GACCTGGAAC CCGACCGACC TTTACTTCAT
GGATTCATAC CCGACTTAGA TCTGAAAAGC CTGCGTGGAT TAACGGATGC AGAGAAACTA
CCCATATTCC GTCCTATGGT CGCCCTGGAT GATATGTCCG CAAGGATGAA ACACTCTTTA
GGCCAGATTG GAAAAACGAT TACTACCTGG CCTCAGCTGG CATCTTCTGT GGTGCTGGGC
GGCGCCGTAG TAACCGATAC CTGCAGAAGG ATACTGCTTG ACCATTTCAA AAGCTCAGGC
AGGTACTACG TAGATTTTGA ACAAATTCTT GTTTAA
 
Protein sequence
MPGKMTELEH YINQQRTEPD NYTPVFYRLQ HEEQYVDLLA LLAKNPHIRV YDEIYSQLRE 
LMKIRNPTKR LTEEESEQKI REYVGTTPLH AFGVWVYYPW SHRVVHIVDE KDFIELRTSR
NREKITEEEI ALLSSKKIGI IGLSVGQSIA LTLTMERVCG ELRLADFDKV ELTNMNRIRT
GIHSIQTYKV VIAAREIAEL DPFIKVVIYK DGATEENLDD FFTKDGHLDI LVEECDGIDI
KILSRMKAKA LGIPVVMDTN DRGLVDVERF DLEPDRPLLH GFIPDLDLKS LRGLTDAEKL
PIFRPMVALD DMSARMKHSL GQIGKTITTW PQLASSVVLG GAVVTDTCRR ILLDHFKSSG
RYYVDFEQIL V