| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_1306 |
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| Symbol | |
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| ID | 8357423 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 1557842 |
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| End bp | 1561144 |
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| Gene Length | 3303 bp |
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| Protein Length | 1100 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 644963463 |
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| Product | TonB-dependent receptor plug |
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| Protein accession | YP_003121005 |
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| Protein GI | 256420352 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.634411 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTATTAA AAAAATGCCT GTCAGCCATC CTCGGGCTGA TCAGCTTACC TATGCTACTA
CTTGCCCAGG AGACTACCTC CGAAATCCAC GGGCAGGTGA AAGATGGGCA AACGGGAGTT
CCCGGAGCTA TCATTATCGC ACTACACAAT CCCACCGGAA CAAAGTACAT GACGACCACC
CGTAAGGATG GACGTTATAA CGTACCAAAC GTCCGTGTCG GAGGACCGTA CACCATTTCT
GTATCCTACA TCGGATACAA AGATCAAAAG ATTGAGAACG TAACCCTCTC CCTGGGACAG
GAGTATGCCG GTGACTTCAA CATCGTACCT GACACTAAAC AACTGAGTGA AGTTGTGATC
AAATCAGGTA AACAAGACAA AACATTTAAT AACGGCCGTA CAGGTGCACA GGAGATCATC
AGTCGTGACC AGCTGGAAAA GCTGCCTACC ATTAACAGGT CAGCACAGGA CTTCACCAAA
CTGGAACCTA CTTCAGCCAG CACTGCCGGC GGACAAAGTT TTGGCGGTCG CAGCAACCAG
TATAACAACT TTACTGTGGA TGGTGCGAAC TTCAACAACT CATTCGGTCT GTCAGGTACG
CTTGGCGGTC AGGCAGGTGC ACAGCCAATC TCTCTGGATG CGATCGATCA GATCCAGGTG
AATGTTGCAC CTTATGACGT ACGTCAGGGT GGGTTCTCCG GCGCTGGTGT TAATACCGTG
ACCAAAAGCG GTTCTAACAC ATTCAGAGGA TCAGTGTACA CTTACTTCAA AAATGAAGGT
ACACAGGGTT ATAAAGTAGA GAATGCAGTT GTTCCAAAAA CTGACCTCTC TTTCAACATC
CGTGGTGCTT CCCTGGGAGG TTATCTCGTT AAGAACAAAG TATTCTTCTT TGTGAATGGC
GAATCCTCCC GTCAAACAGC GCCTGCTACC AGCTGGATCG CATCTGATGC TTCAAATACG
CCGAACAGCG GAGCCGGTAT CTCCAACGCG AATGCTGACA CACTGGCTGC ACTGTCTAAT
TTCCTGAAAA CGAATTTTGG TTATGATCCA GGTGCATACG CTGGTTATTC CTTCAAAACA
AACAGTGACA AGATCACTGC TAAAATTGAC TGGAACATCA ATAATAATCA CACGCTGACA
CTGAAATATA ACTACCTGAA ATCATCTTCT GATCAGTTTG CAAGTACCAG CAGACCAGCA
GGTGTTACAG GTGGACAGCC TGGTTTCAAT TCTATGCCAT TCTATGGAAG TGGTTATGTA
ATCAACAATA ACTTCAACAT CTTTATTGCG GAGCTGAACA GCCGTTTCGG TAACTCAGCA
TCCAATAAAT TCCAGATCGG TTACACTGCC CTGCGTGATT TCCGCTCTTC TCATTCCAAT
TCCAGCACGT TCCCACTGGT CGATATCCTG AATAACGGTA ACATCTATAC TTCCTTTGGT
TACGAGCCCT ACACTTACAA CAACGTCCTG AACACAGACG TATTCCAGAT CTCAGATATC
TTCACCTTTT ATAAAGGTGC ACATGAGATC ACCGTAGGTA CACAGGATTA TTATAGAAAA
TACAAAAACG CATTTGCTCC CGGTTACCAG GGCGCTTACC AGTTTGCAAG TCTGACTGAT
TTCTACAATA GCGTTAAAAA TAACAATGTG CCTGCAAAAA GCTATTACCT GCAGTATTCC
GCATTGCCTG ATGGTTCTTT CCCATGGGCT TATGCTGGAT CAACTGAATT AGGTTTGTTT
GCACAGGATA AATGGCGCGT GACTGACAAG TTCACACTGA CCTACGGTCT GCGTCTTGAT
ATGACCATTT ACAAACAGGA TTTCCAGGAC AACCCGAACT TCAATGCCCT CAAATTTAAA
GATGGCAAAA GCTACGACAT CGGAAAGGCG CCGGGCAATG CATTGCTGAT CTCTCCACGT
ATCGGTTTCA ACTGGGACGT ACTGGATGAT AAGACCTTAC AGGTACGAGG TGGTTTAGGG
ATCTTCTCCG GTCCTCCTCC ATTTGTATGG ATCAGCAACC AGGCTAGTAA CAACGGTGTA
CAGTGGGGTT CATTTACTGC GAATGACAAA ACGTTCAGTG CAGATCCTAC CAAGTATATT
CCAGGTGAGC TGAGTGCTAA TAAAAACTAC GCAGTAGCGC TGACCGACAA GAATTTCAAA
TACCCTTCCG TATTGAAATC AAGTATAGCA GTTGATAAGA AACTGCCAGG TGACTGGGTA
TTTACAGTAG AAGGTACCTA TTCTAAAGAC ATCAACGCTG TATACTTCCA GAACATTAAC
CTGAATGAAA CAAACGGTTT TGCACTGAGC AACGGTGGCG ATCACAGAGA CCGTTATCTC
ACTGTTGCTA ACAGTAACAA GTATTATTAC GCAGGTACAG GTCTGGATAA TCCTAACATT
GGTAACGCCA TCCTGATGAG CAACACTAAC AAAGGTTACT CTTACAACGT TACTGGTCGT
ATCCAGAAAA CTTACAAAAA CCTGTATGTA AGCGTTGCTT ATACACATGG TGATGCACGT
AACGCTGCTG AAACAGGTAG CACCGCTTCT TCCCTGTGGA GCGCACGTGC AGTAAGCACT
GACCCGAATG GTGAAAACCT GGCGTATGCT TCTTACAGAC TGCCTAACCG TATTATCGCA
ATGGCGTCTT ATAAAGTATC TTACGCTAAA TACTTCTCTA CTTCATTTGG TCTGATCTAT
GAAGCTGCAC CTGCCGGTGT TACTTCTTAT ACCTACAATG GCGACCTGAA TGGTGATGGT
TTCAACAATG ATCTGATGTA CATCCCTAAA AACGATAAAG ACATCAACCT GATCAATGTC
GGCTCTTACA ATGCTACCAC ACACACAGGT TCTACTACCG GTACAGCAGC TGACCCAAGA
ACGGCGGCTC AGACCTGGAC ACAGCTGAAC AACTTCATTA ACCAGAGCGG TTACCTGTCT
TCTCACCGTG GAGAGGTTGC AAAAGCAAAC GCAGTAACAC TACCTTTCTT CAAGAAAGCG
GACGTAAACG TTACTGAAGA TATCTCCATG AAGACTGGTA AAACCCGTCA CACACTGCGC
TTATCCCTGG ATATCATTAA CGTGGGCAAC CTGTTAAACA AAAACTGGGG TATCGTAAAA
GCAACAACAG TGACCAACCC GCTGAAGTAT GAAGGCCTGG CGGCAGATGG TACAACACCA
CTGTTCTCCT TCCCTTATGC AGACCCAAAC AACCAGGTAC ACCTGACCAA CAGCTTTGCA
AACAACACAG CGATCATTTC CCGCTGGCAG ATGCAGTTCG GTATCAGATA CCTGTTTAAC
TAA
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| Protein sequence | MLLKKCLSAI LGLISLPMLL LAQETTSEIH GQVKDGQTGV PGAIIIALHN PTGTKYMTTT
RKDGRYNVPN VRVGGPYTIS VSYIGYKDQK IENVTLSLGQ EYAGDFNIVP DTKQLSEVVI
KSGKQDKTFN NGRTGAQEII SRDQLEKLPT INRSAQDFTK LEPTSASTAG GQSFGGRSNQ
YNNFTVDGAN FNNSFGLSGT LGGQAGAQPI SLDAIDQIQV NVAPYDVRQG GFSGAGVNTV
TKSGSNTFRG SVYTYFKNEG TQGYKVENAV VPKTDLSFNI RGASLGGYLV KNKVFFFVNG
ESSRQTAPAT SWIASDASNT PNSGAGISNA NADTLAALSN FLKTNFGYDP GAYAGYSFKT
NSDKITAKID WNINNNHTLT LKYNYLKSSS DQFASTSRPA GVTGGQPGFN SMPFYGSGYV
INNNFNIFIA ELNSRFGNSA SNKFQIGYTA LRDFRSSHSN SSTFPLVDIL NNGNIYTSFG
YEPYTYNNVL NTDVFQISDI FTFYKGAHEI TVGTQDYYRK YKNAFAPGYQ GAYQFASLTD
FYNSVKNNNV PAKSYYLQYS ALPDGSFPWA YAGSTELGLF AQDKWRVTDK FTLTYGLRLD
MTIYKQDFQD NPNFNALKFK DGKSYDIGKA PGNALLISPR IGFNWDVLDD KTLQVRGGLG
IFSGPPPFVW ISNQASNNGV QWGSFTANDK TFSADPTKYI PGELSANKNY AVALTDKNFK
YPSVLKSSIA VDKKLPGDWV FTVEGTYSKD INAVYFQNIN LNETNGFALS NGGDHRDRYL
TVANSNKYYY AGTGLDNPNI GNAILMSNTN KGYSYNVTGR IQKTYKNLYV SVAYTHGDAR
NAAETGSTAS SLWSARAVST DPNGENLAYA SYRLPNRIIA MASYKVSYAK YFSTSFGLIY
EAAPAGVTSY TYNGDLNGDG FNNDLMYIPK NDKDINLINV GSYNATTHTG STTGTAADPR
TAAQTWTQLN NFINQSGYLS SHRGEVAKAN AVTLPFFKKA DVNVTEDISM KTGKTRHTLR
LSLDIINVGN LLNKNWGIVK ATTVTNPLKY EGLAADGTTP LFSFPYADPN NQVHLTNSFA
NNTAIISRWQ MQFGIRYLFN
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