| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_1279 |
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| Symbol | |
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| ID | 8357395 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 1529335 |
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| End bp | 1530750 |
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| Gene Length | 1416 bp |
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| Protein Length | 471 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 644963435 |
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| Product | bifunctional UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase/(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase |
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| Protein accession | YP_003120978 |
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| Protein GI | 256420325 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0774] UDP-3-O-acyl-N-acetylglucosamine deacetylase |
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| TIGRFAM ID | [TIGR00325] UDP-3-0-acyl N-acetylglucosamine deacetylase
[TIGR01750] beta-hydroxyacyl-[acyl carrier protein] dehydratase FabZ |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.270455 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGATAATC AACAGTCGTC TAATCAACAC ACGATTAAAG ACCCAGTTAC AATATCGGGT
GTTGGTTTAC ACACAGGAGC CCATGTAAAT ATGACTCTGA AGCCGGCTAC CCCCGGTTAT
GGTATTAAAT TTCAGCGTGT GGATCTGCCA GGACAACCTG TAGTGAAAGC CGATGTAGAT
TATGTTGTGG ATACATCCCG CAGCACAACG CTTGAACACA ATGGCGCCCG CGTTAGTACG
ATAGAGCACA TCATGGCTGC CCTGGTTGGT ACCGGCGTAG ACAATGTGCA CATTGAAATC
GATGGTCCTG AAATCCCTAT CATGGATGGT AGTTCCTACC CTTTTATCCA GAAAATAGAG
GAAGCAGGTA TTGCAGAACA GGATGCGAAA AAAATATGGT ATACGATTGA TACCAACATC
AGCTTCTACG ACGATAAAAA GAACGTAGAA ATGGTAGCAT TACCAGCTGT TGACTATCGC
ATCACCTGCA TGATCGATTT CAACTCTCCG ATATTAGGTA CACAGCACGC TAATCTTAAC
AGCCTGCAGG ATTTCAAACA GGAAGTAGCG CCATGCCGCA CCTTCGTGTT TCTGCACGAA
CTCGAATACC TGATATCCAA CAACCTGATC AAAGGCGGCG ATATTAATAA CGCTATTGTG
ATCGTAGATA AAGCGGTAAG TGAAGAACAA CTGGGCCATC TGGCAAAAGT GTTCAACCGT
GAACATATCA GCGTAGCACA GCGGGAAGGT ATCCTCAATA ATATTCAGCT TCACTTCCCG
AATGAACCGG CACGTCACAA ACTGCTGGAC ATCGTGGGAG ACCTCGCACT GGTAGGTGTG
CCTATTAAGG CGCATATCAT TGCAAACCGT CCCGGACATG CTTCCAACGT GGAGTTTGCC
CGTAAGATCA AGCAATATAT CAAGAAGAAC AAGCATATCA AGGATATGCC TGTATACGAT
CCTAGTAAAC CAGCTGTCTT CGACGTACCA CGTATTGAAA GAACATTGCC GCATCGTTTT
CCGATGCTGC TGGTGGACAA GATCATCGAT CTCACCGATA CGCAAGTAGT AGGTATCAAG
AACGTTACCT TCAACGAACC ATTTTTCCAG GGGCACTTCC CAAGTAATCC GGTGATGCCG
GGTGTACTCC AGGTGGAAGC ACTGGCACAA TGTGGTGGCA TTCTTGCACT CAGCACTGTT
CCGGATCCTC ATAATTACGA TACCTACTTT ATCAAGATAG ACAACTGTAA GTTCAAGCAG
AAAGTGGTTC CCGGAGATAC CATGATCCTG AAAATGGAAT TACTTAGCCC TATCAGGAGA
GGTATAGTGG AAATGAGAGG AACCGTATTT GTAGGTAACA AGGTAGTTAC TGAAGGTGAC
CTGACCGCTC AAATCATTAA AACAAGAGAA AGCTAA
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| Protein sequence | MDNQQSSNQH TIKDPVTISG VGLHTGAHVN MTLKPATPGY GIKFQRVDLP GQPVVKADVD
YVVDTSRSTT LEHNGARVST IEHIMAALVG TGVDNVHIEI DGPEIPIMDG SSYPFIQKIE
EAGIAEQDAK KIWYTIDTNI SFYDDKKNVE MVALPAVDYR ITCMIDFNSP ILGTQHANLN
SLQDFKQEVA PCRTFVFLHE LEYLISNNLI KGGDINNAIV IVDKAVSEEQ LGHLAKVFNR
EHISVAQREG ILNNIQLHFP NEPARHKLLD IVGDLALVGV PIKAHIIANR PGHASNVEFA
RKIKQYIKKN KHIKDMPVYD PSKPAVFDVP RIERTLPHRF PMLLVDKIID LTDTQVVGIK
NVTFNEPFFQ GHFPSNPVMP GVLQVEALAQ CGGILALSTV PDPHNYDTYF IKIDNCKFKQ
KVVPGDTMIL KMELLSPIRR GIVEMRGTVF VGNKVVTEGD LTAQIIKTRE S
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