| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_1271 |
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| Symbol | |
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| ID | 8357387 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 1521089 |
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| End bp | 1523302 |
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| Gene Length | 2214 bp |
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| Protein Length | 737 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 644963427 |
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| Product | ABC transporter related |
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| Protein accession | YP_003120970 |
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| Protein GI | 256420317 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG2274] ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGATCAGAT TTTCCTCATT TCCGTTCTTC AGGCAGCTGG ACCAGATGGA CTGCGGAGCA
GCCTGTCTGA AGATGATCTG TGCTTTTTAC AAAAAGAATT ATTCCATTCA GCAGCTCAGG
GAAATGTCGG GTATCACCAG ACAGGGCGTT TCTGTACTGG GGCTTTGCGA CGCCGCGGAA
CAGATCGGGA TGAAAACACT GGCGCTCAAT ATCAGTTTTG AGTCGCTGGT GAACGACGTA
CCGCTGCCTT GTATCGTACA CTGGCGGCAG CGACATTTTG TGGTGGTCTA TAAGACAGAT
GATCAGCATA TCTGGGTGGC AGATCCTGCT TTCGGTAAGG TAAAATATAC CCACGCAAAG
TTTCTGGAAG GCTGGTTATA CAACAAGAAG ACTAAGAAAG AGGAGGAACA GGAAGGATTT
GCCCTGTTTT TAGAACCTTC TGCGGAGTTT TATAATAGAG AGGACCAAGT AGCAGGGCGA
CCTCTTGATC TGCGATTTTT GCTGCCTTAT TTGCGCTCAC ATAAGCAGAT ACTCTATCAG
GTGATGATCG GAGTACTGAT TCTTTCTTTT ATACAGGTCG TTTTCCCTTT TCTGACAAAG
GCGCTGGTCG ATAAAGGTAT CCGGTTTAAT AATCTCAATT TTGTATACCT GATTCTAGCC
GGGCAACTGG TGTTATTTCT GTCACAGACG GGGGCCGAAA TAGTGCGCCG CTGGCTGTTG
CTGTACATGA GTAAGCGTGT AAATATCGCC ATCGTTTCCG ACTTCCTGGT GAAGATGATG
AAACTGCCGA TCGCGTTTTT TGATTCCAAA ATGATCACTG ATCTTATTCA GCGTATAGAA
GATCAGAAGC AGATAGATAC CTTCTTATCC AATACCTCAC TTAGTGTATT GTTTTCCCTG
ATCAACATAT TGTTGTTCGG CACAGTACTG TGTGTATTCA GCTTTCCTTT ATTCCTGATT
TTCCTGGCGG GGAGTACGTT GTACTTTACC TGGATCATGT TGTTTGTAAA AAAGCGGGCT
GTCCTGAGTT ATAAAAGAAG GGACGAGTCA GTAGAAAACA GGAGTAGTAT TCTTGAGATC
ATGCATGGTA TCCAGGAAGT GAAACTGAAT AATAGTGAGC GCCGACGCAG ATGGGAGTGG
GAGTCTGTTC AGAACAGGGT GTATAACACA GCGGTGAAGG AATTGCGCCT GGAGCAGTTA
CAGGTAGTAG GTGGTAATTT CCTCCTGCAG CTGATGAATA TCATTATCAC TTTTGTGGCT
GCCTGGTCAG TAATAGAAGG TAGAATTACC CTAGGTGTGA TGCTGGCCAC ACAATACATC
ATCGGACAAC TGGCTACGCC GCTGAATAGT TTTGTGGCAT TCATCCATGG CGCCGCAGAA
GCCCGTATCA GTATAGAGCG CATAGGAGAG GTACTGAATG TGGAAGAGGA AGATAAACAG
AAGCATACTT TCGATGTATC TGACGAAGAA AATGATCTGG TGCTGGATAA TGTCTCCTTC
CGTTATGGAA GCGCCAGTTC GCGGCTGGTA CTAAAGAATA TCAGTCTGAC CATTCCCCGG
GGAAAAGTAA CGGCTATAGT GGGAACCAGT GGTAGCGGAA AAACAACCCT GATGAAACTA
TTGCTGAAGT TTTATGACCC TACTTCCGGT AGCATTAATC TTGGTGACAA ATCACTGGAA
GGTCTGGACA GCCGTCACTG GCGTAGCAAC TGTGGTGTGG TGATGCAGGA CGGGTTCATT
TTTGCGGATA CTGTACTACG CAATATTACA GAGTCGGATA ACGATTATAC GATTGATAAA
GAAAGGTTGC AGCAGGCGGT GCATGTTGCC AACATTGAAG ATATGATCGA GCAATTACCT
TCCGGTTATC ATACGAATCT GAGTCACGGG GGCATTGCTT TAAGTGGTGG GGAATACCAG
CGTGTATTGA TCGCGCGGGC GGTCTATAAA GGTCCGGCCT TCCTGTTCTT TGACGAGGCA
ACCAGTTCGC TGGACGCTAA TAATGAAAAA GTGATCATGG AGAATCTGCA GGAGTTTTTT
AAAGGGAGGA CAGTTGTGAT TATTGCACAC CGTTTAAGTA CCGTAAAACA TGCGGATAAG
ATCATCGTTC TGGATAAAGG AGAGATCATA GAAGAAGGTG ATCATACGGA GCTGGTGGCG
CTGAAGCAAC ATTACTTCAA ACTTGTAAAG AATCAACTGG AACTGGGAAA ATGA
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| Protein sequence | MIRFSSFPFF RQLDQMDCGA ACLKMICAFY KKNYSIQQLR EMSGITRQGV SVLGLCDAAE
QIGMKTLALN ISFESLVNDV PLPCIVHWRQ RHFVVVYKTD DQHIWVADPA FGKVKYTHAK
FLEGWLYNKK TKKEEEQEGF ALFLEPSAEF YNREDQVAGR PLDLRFLLPY LRSHKQILYQ
VMIGVLILSF IQVVFPFLTK ALVDKGIRFN NLNFVYLILA GQLVLFLSQT GAEIVRRWLL
LYMSKRVNIA IVSDFLVKMM KLPIAFFDSK MITDLIQRIE DQKQIDTFLS NTSLSVLFSL
INILLFGTVL CVFSFPLFLI FLAGSTLYFT WIMLFVKKRA VLSYKRRDES VENRSSILEI
MHGIQEVKLN NSERRRRWEW ESVQNRVYNT AVKELRLEQL QVVGGNFLLQ LMNIIITFVA
AWSVIEGRIT LGVMLATQYI IGQLATPLNS FVAFIHGAAE ARISIERIGE VLNVEEEDKQ
KHTFDVSDEE NDLVLDNVSF RYGSASSRLV LKNISLTIPR GKVTAIVGTS GSGKTTLMKL
LLKFYDPTSG SINLGDKSLE GLDSRHWRSN CGVVMQDGFI FADTVLRNIT ESDNDYTIDK
ERLQQAVHVA NIEDMIEQLP SGYHTNLSHG GIALSGGEYQ RVLIARAVYK GPAFLFFDEA
TSSLDANNEK VIMENLQEFF KGRTVVIIAH RLSTVKHADK IIVLDKGEII EEGDHTELVA
LKQHYFKLVK NQLELGK
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