Gene Cpin_1260 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_1260 
Symbol 
ID8357376 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp1507025 
End bp1507447 
Gene Length423 bp 
Protein Length140 aa 
Translation table11 
GC content47% 
IMG OID644963416 
Productprotein of unknown function UPF0079 
Protein accessionYP_003120959 
Protein GI256420306 
COG category[R] General function prediction only 
COG ID[COG0802] Predicted ATPase or kinase 
TIGRFAM ID[TIGR00150] ATPase, YjeE family 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones48 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAATGGA CATTTTCTCA GGAAGATCTG CCTGCCACGG CTGAAAGCTT CTGGCAACAT 
TACAAGGGGC AACATATATT TACCCTGGAA GGCCCGATGG GAGCAGGTAA AACCACGTTT
ATAAAAGCTT TATGCGCCGC CAGAGGTGTA GAAGATGCGA CTGCCAGTCC CACTTTTTCC
ATTATCAATG AATATGCTTT CAGGGAAAAT GGCCAGCAGT ATAGCATTTA TCACCTCGAT
CTCTATCGTC TCAAAGACGA AGAAGAGGCC ATCGCTGCCG GCGTAGAAGA TACCATATAC
CGCGATCATG CAATCAGTTT CGTAGAATGG CCTGACATCA TTAACGATCT GCTGCCTCCG
GATACCATCC GGCTGCAGTT ATCAGTGTTA CCGGATAAAA AAAGGCTTTT ACGCGCCGGA
TAA
 
Protein sequence
MEWTFSQEDL PATAESFWQH YKGQHIFTLE GPMGAGKTTF IKALCAARGV EDATASPTFS 
IINEYAFREN GQQYSIYHLD LYRLKDEEEA IAAGVEDTIY RDHAISFVEW PDIINDLLPP
DTIRLQLSVL PDKKRLLRAG