Gene Cpin_1257 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_1257 
Symbol 
ID8357373 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp1503645 
End bp1504445 
Gene Length801 bp 
Protein Length266 aa 
Translation table11 
GC content45% 
IMG OID644963413 
Productundecaprenol kinase 
Protein accessionYP_003120956 
Protein GI256420303 
COG category[V] Defense mechanisms 
COG ID[COG1968] Uncharacterized bacitracin resistance protein 
TIGRFAM ID[TIGR00753] undecaprenyl-diphosphatase UppP 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACTCT GGCAGGCCAT CATTATTGCA ATTGTGGAAG GATTAACCGA ATTTTTACCT 
GTATCATCTA CAGGACATAT GGTAATCACC AGTGCATTGT TAAAGCTCAA CAAAGACGAA
TTTACCAAGC TGTTCGAAGT ATGTATCCAG TTAGGCGCTA TCCTGGCGGT AGTGGTACTT
TACTGGAAGA AATTCCTGGT ATTTGATAAG AACCGGGTCA ACTTTTATAT TAAACTGGTA
GTGGCAGTAT TACCTGCATT GATTGTAGGT TACCTGTTTG CCGATAAAAT TGACGCCCTG
CTGGAAAGTC CGCTGGTCGT TGGGATTACA TTACTCGTAG GCGGTGTTGT GCTGCTGTTT
GTAGACAACT GGTTTACCAA ACAAACCATC GAAAGGGATG AAGATATGAG CCTGTTTAAG
GCTTTACGTA TCGGTTTCTG GCAATGTGTG GCCATGATAC CCGGTGTAAG TCGCAGCGCA
GCGACTATCA TCGGCGGTAT GCAGCAAAAG CTCACCCGCA ACGTAGCGGC TGAATTTTCC
TTCTTCCTCG CGGTACCAAC CATGGCAGCT GCTACAGGTT ACAAACTGCT GAAAGGACGT
GAATTGCTCA TGTCCAATAC AGAGAACCTG AAGCTTCTTC TGATCGGTAA TGTCGTAGCG
TTTGTAGTGG CAATGGTGGC GATCAAGTTT TTTATCAATG CTCTGAAAAA ATACGGCTTC
AGAGTATGGG GCTACTACCG TATCGTGGTA GGTATTGCTA TCCTGGTGGC GATCGGCCTG
GGATATAAAT TATCTGTGTA A
 
Protein sequence
MELWQAIIIA IVEGLTEFLP VSSTGHMVIT SALLKLNKDE FTKLFEVCIQ LGAILAVVVL 
YWKKFLVFDK NRVNFYIKLV VAVLPALIVG YLFADKIDAL LESPLVVGIT LLVGGVVLLF
VDNWFTKQTI ERDEDMSLFK ALRIGFWQCV AMIPGVSRSA ATIIGGMQQK LTRNVAAEFS
FFLAVPTMAA ATGYKLLKGR ELLMSNTENL KLLLIGNVVA FVVAMVAIKF FINALKKYGF
RVWGYYRIVV GIAILVAIGL GYKLSV