Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_1233 |
Symbol | |
ID | 8357349 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 1478324 |
End bp | 1479901 |
Gene Length | 1578 bp |
Protein Length | 525 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 644963389 |
Product | ATP synthase F1, alpha subunit |
Protein accession | YP_003120932 |
Protein GI | 256420279 |
COG category | [C] Energy production and conversion |
COG ID | [COG0056] F0F1-type ATP synthase, alpha subunit |
TIGRFAM ID | [TIGR00962] proton translocating ATP synthase, F1 alpha subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTGGAGA TAAAACCTGA TGAAATTTCG GCGATATTAC GCCAGCAACT AAGCAACTTC AATGCTGCTG CCGACCTGGA AGAGGTAGGT ACAGTACTGC AGGTTGGAGA TGGTATCGCT CGTATCTATG GATTAAACAA CGTTGGTTAC GGTGAACTGG TTGAGTTCGA AAACGGCGTA AAAGCTATCG CACTGAACCT GGAAGAAGAC AACGTAGGTG TGGTATTGAT GGGTGAATCC GGAGAGATTA AAGAAGGTTT TAAAGTACGC CGCACCGGCC AGATCGCATC CATTAAAGTG GGTGAAGGCA TGGTTGGTCG TGTTGTAAAT ACGCTGGGTG CTGCTATCGA TGGTAAAGGC CCAATCACTG GCGAACTGTA CGAAATGCCA CTGGAGCGTA AAGCTCCGGG TGTTCTGTTC CGTGAACCAG TAAAAGAACC ACTGCAGACA GGTATCAAAG CGATTGATGC GATGATCCCG GTTGGTCGTG GTCAGCGTGA GCTGGTGATC GGTGACCGTC AGACCGGTAA AACCGCGATC TGTATTGACA CTATCATCAA CCAGAAAGAA TTCTTCGACG CTGGTAAACC AGTATATTGT ATCTATGTAG CAGTAGGTCA GAAAGCATCT ACCATCGCTG GTGTGATGAA AACCCTGCAG GAAGCAGGCG CTATGGCTTA CACTACCATC GTTGCAGCTT CTGCGGCAGA TCCTGCTCCT CTGCAGTTCT ACGCTCCATT CGCTGGTGCT GCCATCGGGG AGTTCTTCCG TGATACCGGT CGTCCTGCAC TGATCGTTTA TGATGATCTG TCTAAACAGG CGGTAGCTTA CCGTGAGGTA TCTCTGCTGC TCCGTCGTCC TCCTGGTCGT GAAGCTTATC CTGGTGACGT ATTCTACCTG CACTCCCGTC TGCTGGAACG TGCGGCGAAA GTAATCAGCA AGGATGACAT CGCTCAACAG ATGAACGACC TGCCAGCGTC AATCAAACAC CTGGTAAAAG GTGGTGGTTC CCTGACAGCG CTGCCTATCA TCGAAACACA GGCTGGTGAC GTATCCGCTT ACATTCCGAC AAACGTAATC TCCATCACTG ACGGTCAGAT CTTCCTGGAA TCCAACCTGT TCAACGCAGG TATCCGCCCG GCGATCAACG TAGGTATCTC CGTAAGCCGT GTAGGTGGTA ACGCACAGAT CAAATCCATG AAGAAAGTAT CTGGTACCCT GAAACTGGAC CAGGCACAAT ATCGTGAGAT GGAAGCGTTC TCCAAATTCG GTGGTGACCT GGATGCTGCA ACCAAAGCAG TACTCGATAA AGGTGCCCGT AACGTGGAAA TCCTGAAACA GGCACAGTTT ACTCCATACG CTGTGGAAAA ACAGGTAGCA ATGATCTATC TGGGTACACA GGGTCTGCTG CGTGACGTTC CTGTTAAGAA TGTAAAAGCA TTCGAAGAAG CGTTCCTGAA CGAAATGGAA GTACGTCTGC CTGAAGTTTT GGGTGAATTC AAGAAGGGTA ACCTGCCTGA TGATGGTATC AAACGCATGG TAACTCTGGC TAACGAACTG AAACCAAGAT TCGCTTAA
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Protein sequence | MVEIKPDEIS AILRQQLSNF NAAADLEEVG TVLQVGDGIA RIYGLNNVGY GELVEFENGV KAIALNLEED NVGVVLMGES GEIKEGFKVR RTGQIASIKV GEGMVGRVVN TLGAAIDGKG PITGELYEMP LERKAPGVLF REPVKEPLQT GIKAIDAMIP VGRGQRELVI GDRQTGKTAI CIDTIINQKE FFDAGKPVYC IYVAVGQKAS TIAGVMKTLQ EAGAMAYTTI VAASAADPAP LQFYAPFAGA AIGEFFRDTG RPALIVYDDL SKQAVAYREV SLLLRRPPGR EAYPGDVFYL HSRLLERAAK VISKDDIAQQ MNDLPASIKH LVKGGGSLTA LPIIETQAGD VSAYIPTNVI SITDGQIFLE SNLFNAGIRP AINVGISVSR VGGNAQIKSM KKVSGTLKLD QAQYREMEAF SKFGGDLDAA TKAVLDKGAR NVEILKQAQF TPYAVEKQVA MIYLGTQGLL RDVPVKNVKA FEEAFLNEME VRLPEVLGEF KKGNLPDDGI KRMVTLANEL KPRFA
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